Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2664 ATGTCTCTACACAAACTTGCTCGCCGTCTTCTGCTGGACCATGATTCAAGCCCAACCACACCGGAGAGCATATACAGGACGAGGATGACTTATACAAGTGACGCTAATTTTGACACCAACATGGTGATCATATTAGCAGCCTTGCTTTGTGCACTCATATGTGCGTTGGGTCTGAATTCAATAGTAAGATGCGCTCTCAGATGCAGCCGAAGGTTGGCTTTTGAGACGGCGGAGGAGGCAGCGGCTCGTTTGGCTGCTAAAGGGCTGAAGAAGAGTGCGTTGCGTCAGATACCTATAGCTGCGTGTGGTTCATCAGGAGCTGAGATTGCAGGCACAGATTGTCCAATTTGCTTAGGGGAGTTCGTGGACGGAGAGAAAGTTAGAGTTCTTCCAAAATGCAACCATGGATTCCATGTAAAGTGCATAGACACGTGGCTGCTCTCTCATTCATCTTGTCCTACTTGCAGGCAGACTCTTCATGAACCCACCATTTCTAAGGCTGTGTCCGTACCTGCTGATCACGCTGTTTAA 531 0.4859 MSLHKLARRLLLDHDSSPTTPESIYRTRMTYTSDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETAEEAAARLAAKGLKKSALRQIPIAACGSSGAEIAGTDCPICLGEFVDGEKVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQTLHEPTISKAVSVPADHAV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2664 176 Pfam Ring finger domain 113 156 IPR001841 -
Acco10g2664 176 SMART FANCL_C_2 110 173 - -
Acco10g2664 176 PANTHER RING-H2 FINGER PROTEIN ATL78 7 169 IPR044602 GO:0016567|GO:0016740
Acco10g2664 176 CDD RING-H2_EL5-like 113 156 - -
Acco10g2664 176 SMART ring_2 114 155 IPR001841 -
Acco10g2664 176 SUPERFAMILY RING/U-box 109 162 - -
Acco10g2664 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 164 IPR013083 -
Acco10g2664 176 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2664 Acco-ChrAcco10 37233673 37234203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2664 33 159 C3H Transcription Factor Family AT3G10910 65.185 4.00e-56 173