LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco10g2657	ATGGCAAACCCCAGAAAGCAGAAATTAGACTTAGAAACCATGGAAGAGATTATTGGTTGGTTAATACAGCGTCCTTGTGAATTATCTAGACAGCTTGAATCAAATCTTCCCAACTTGGCTAACCAACCTGATATTCTCTTCACGTCCATTGATGAGATAGTGAATACGTTTTTGGCCGCAAAAGAAAGCCTAAGAATGTTTTCCCAACATCAAACACCACCTTCTTCTTCCTTTGATCAGATGCCTACAACTTCTAATTTCATGCCGGAATGGCCAATTAGATCTACCAGTCATGCACAACCCACGGATCAGTCGATTCATGATCAAATGCAACGACCTCGAGCAGCTCAAAAGCGAATGCGAAAGAGGAAGAATGATTTGGAGACGAAGACAGTGATGGTAGAAGCGCCTACGTTTGGGAACACGGAGATTCCACCAGAAGATGGTTTCACTTGGCGTAAATATGGCCAGAAAGAGATATTTGGCTCTTTCTACCCAAGGAGTTATTACAGGTGCACACACCAGAAATTATATAAATGTCCGGCGAAGAAGCAAGTCCAGAGAGTTGATAACAACCCAAACACATTTGCAGTAACATACAGAGGCAGTCACACTTGCGTCATGTCCTCCACAGCTCCATCTTCAGTTCCTCCTCCACACCTTTTGGTTGACTTCAACATCGCCGTATCCCCTCAGTTATCTTCATCTTCTACTTCTGTTTCCCGGTGGCTCCCCTCGCCCCACCTCGGCCTCTGCACTGGGGGTGCCACCGCCGCTCCGCCTGGCACTGCCAGTGGAGGCCCCTCCACTTCAAGATATGGTAGTAGTACTGATTATACGGTGGCAGATATGGCTGATGCTATGTTTAATAATTCTACCAGCAGTAGTGCTGCTAACGCGCGGTACCATTGA	912	0.4638	MANPRKQKLDLETMEEIIGWLIQRPCELSRQLESNLPNLANQPDILFTSIDEIVNTFLAAKESLRMFSQHQTPPSSSFDQMPTTSNFMPEWPIRSTSHAQPTDQSIHDQMQRPRAAQKRMRKRKNDLETKTVMVEAPTFGNTEIPPEDGFTWRKYGQKEIFGSFYPRSYYRCTHQKLYKCPAKKQVQRVDNNPNTFAVTYRGSHTCVMSSTAPSSVPPPHLLVDFNIAVSPQLSSSSTSVSRWLPSPHLGLCTGGATAAPPGTASGGPSTSRYGSSTDYTVADMADAMFNNSTSSSAANARYH	303

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco10g2657	303	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	22	217	IPR044810	GO:0003700
	Acco10g2657	303	SUPERFAMILY	WRKY DNA-binding domain	144	207	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Acco10g2657	303	Gene3D	WRKY domain	129	208	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Acco10g2657	303	MobiDBLite	consensus disorder prediction	68	111	-	-
	Acco10g2657	303	ProSiteProfiles	WRKY domain profile.	147	204	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Acco10g2657	303	SMART	WRKY_cls	146	208	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Acco10g2657	303	MobiDBLite	consensus disorder prediction	68	126	-	-
	Acco10g2657	303	MobiDBLite	consensus disorder prediction	255	274	-	-
	Acco10g2657	303	Pfam	WRKY DNA -binding domain	147	206	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco10g2657	Acco-ChrAcco10	37203830	37205988	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco10g2657	14	229	WRKY Transcription Factor Family	AT2G40740	41.085	1.89e-50	167

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Acco10g2657		WRKY	2e-25	CL0274