Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2655 ATGAGTGCTCTGGGCTCCGAACATGTCTCTGCAGACAAGGAAAGTATCATCAGAGAACTGTTTGAGGGCAAGGACTGTGCTTCCCAGCTCAAGCTTTTGTTTCAAAACCCTTCTGGGCCTTACGCCACTACTCCCTCTGCACAACAACTTCTCGCCAAAATTTTGAGATCCTTCACCCAAAGTATTTCCTCCCTCACTTCCTCCGAAGCCGGCGGCGAGATTTTGGCTATTTCCTGCAATGACCGGAGGCCGGACGAATCCGGTCAGAGCAGGAAGAGATCACCGCCGCCCGTAAAGGATCGGCGAGGCTGCTACAAAAGAAGGAAGGCAGCAGATACACGGACCAAAATCTCTCAAACTATGGAAGATGAATACGCATGGAGAAAGTACGGACAGAAGGAGATCCTGAATTCTAAATTTCCCAGGAGTTACTTTAGGTGCTCTCGGAAGCACGACCAAGGGTGTAAGGCCGTCAAACAGGTTCAGCGCATAGAGAAGAATCCAGAAATGTTCCTGACAATGTACATTGGAGTTCACACGTGCAAGGATAGCCTCAAGGCTCCCGAAATGGTCACAGATTCTGGTAGTTGGGAATCATATCTGGCGCCGACTGAATCTAAAAATGCACCAAACGATGATCAAAAGGCCTCATCATCGTCTACCCCAACCATAAAGCAGGAATATCCCAAGGAGGACACACCACTGAGTGAAATAACAGATAACTTGGATCCTAATTTGTGGCCAGATTTGAAGGACATTGAGCTTTTTCGGAGCCCTTGA 780 0.4833 MSALGSEHVSADKESIIRELFEGKDCASQLKLLFQNPSGPYATTPSAQQLLAKILRSFTQSISSLTSSEAGGEILAISCNDRRPDESGQSRKRSPPPVKDRRGCYKRRKAADTRTKISQTMEDEYAWRKYGQKEILNSKFPRSYFRCSRKHDQGCKAVKQVQRIEKNPEMFLTMYIGVHTCKDSLKAPEMVTDSGSWESYLAPTESKNAPNDDQKASSSSTPTIKQEYPKEDTPLSEITDNLDPNLWPDLKDIELFRSP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2655 259 Gene3D WRKY domain 106 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco10g2655 259 MobiDBLite consensus disorder prediction 201 244 - -
Acco10g2655 259 MobiDBLite consensus disorder prediction 79 115 - -
Acco10g2655 259 SUPERFAMILY WRKY DNA-binding domain 119 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco10g2655 259 Pfam WRKY DNA -binding domain 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g2655 259 MobiDBLite consensus disorder prediction 84 115 - -
Acco10g2655 259 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 227 IPR044810 GO:0003700
Acco10g2655 259 MobiDBLite consensus disorder prediction 201 227 - -
Acco10g2655 259 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g2655 259 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2655 Acco-ChrAcco10 37193131 37194686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2655 11 250 WRKY Transcription Factor Family AT3G56400 40.000 3.18e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco10g2655 WRKY 3.9e-24 CL0274