Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2641 ATGAACAGCACCAATTCTCTGAAAAGTGAAGAAAACATATCACAAACACAAATGGAAAAAGTGAAGTGGGGCTCCAAGCTGCGCCGTCGAATTCAACGAGTTTTCACCATGGGGAGGAGACCTGCAAGGTGTTATCGTCAAATTAAAAACAAACCTTACCCTAAATCACGCTTTTGCCGTGGTGTTCCTGATCCCAAGATCAGAATTTATGATGTTGGAATGAAGAAGAAAGGTGTTGATGAGTTCCCTTTCTGCGTCCATCTTGTTAGCTGGGAGAAGGAAAATGTTTCAAGTGAAGCACTGGAAGCTGCTAGGATTGCTTGCAACAAATATATGGCCAAATTTGCTGGAAAAGATGCGTTCCATTTGAGAGTTAGGGTTCATCCATTCCATGTTCTTAGGATCAACAAAATGCTTTCATGTGCTGGAGCTGATAGGCTTCAGACAGGGATGAGAGGTGCATTTGGAAAGCCGCAAGGTACCTGTGCTAGAGTTGCCATTGGACAGGTCCTTCTTTCTGTCCGTTGCAAGGACACCAACAAAAATCATGCCCAAGAAGCTCTCCGTCGTGCTAAATTTAAGTTCCCTGGTCGTCAAAAGATCATAGTTAGCAGGAAATGGGGTTTTACCAAGTTTAACCGAACAGACTATCTGAAGTTCAAGTCTGAGAACAGGATTATGCCAGATGGTGTGAATGCAAAGCTTCTTGGATGCCATGGACCATTGGCTCATCGTCAACCTGGAAGAGCTTTCTTGTCCTCTGCAACAGCTTAG 774 0.4406 MNSTNSLKSEENISQTQMEKVKWGSKLRRRIQRVFTMGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDTNKNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYLKFKSENRIMPDGVNAKLLGCHGPLAHRQPGRAFLSSATA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2641 257 MobiDBLite consensus disorder prediction 1 21 - -
Acco10g2641 257 ProSitePatterns Ribosomal protein L10e signature. 144 165 IPR018255 GO:0003735|GO:0005840|GO:0006412
Acco10g2641 257 Gene3D Ribosomal protein L10e/L16 37 253 IPR036920 GO:0003735|GO:0005840|GO:0006412
Acco10g2641 257 FunFam 60S ribosomal protein L10 37 242 - -
Acco10g2641 257 NCBIfam 50S ribosomal protein L16 37 210 IPR001197 GO:0003735|GO:0005840|GO:0006412
Acco10g2641 257 Pfam Ribosomal protein L16p/L10e 48 202 IPR016180 GO:0003735|GO:0005840|GO:0006412
Acco10g2641 257 SUPERFAMILY Ribosomal protein L16p/L10e 40 209 IPR036920 GO:0003735|GO:0005840|GO:0006412
Acco10g2641 257 CDD Ribosomal_L16_L10e 77 202 IPR016180 GO:0003735|GO:0005840|GO:0006412
Acco10g2641 257 PANTHER 60S RIBOSOMAL PROTEIN L10 37 249 IPR001197 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2641 Acco-ChrAcco10 37102676 37108263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2641 37 256 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 86.364 1.49e-144 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1702 05 33360814 33362158 Acco10g2641 10 37102676 37108263 CCT