Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2631 ATGACGTTTGATGCGCAAAGTCGGGGTGTAGCCTTGGAGGAGATGGAGACTTTGAAAGCTGCAATCCCGGAGAGCCTGAAGCGAATGATTGGAGAGAGTACCACAGATGATCTTCCGACCACATGTTCTTCTCTTCACCATTTCTTTCTTCATTTTGAGCCTTTTCACCAAATGGTGAGTGACTTAGCAGACCCAAAAAATGCTTTATGTGGTAAGAGTGAGGCCGCTGCTTTGGAATCCAAGCAGCTTGGCAACCATTACTTCTTGAGAGAAGATTATATGATGGCTTTGAATTGCTATACGAAGGCATTGCGTATGGCTCCTTTGGAGGCTTTTGGCCCGGAGAGGAATCTGGTTGCAATATTATACGTTAATCGAGCTACTGTATTGCATAAATTGAATCTTTTAATTGAGTGTTTGCGAGACTGCACTCGAGCTCTTCAGATATGTCCAAGCTATGCAAAGGCATGGTACAGGAGAGGTAAGGCGAATGTTTCATTGGGAAATCATAAGGATGCAATCTGTGATCTCAATGTGGCAAAGAGCATGGAATCATCATTGAGTGGGAAGAAACAAATAGAAAGTGAACTTAAAAATATATTACCCCAATGCGAGCAAGCAAGTTCAGTAGTTCAGAATGAGAAGAATGGCTTGGATACAGTAGATGAGATGCCCCAAATAAAGCTACAGTTGATCACCACGCCTGGTAAAGGACGGGGTATGACATTGTCATGTGACATATCTCCAGCTTCTTTAGTTCATCGTGAAGAACCTTATGCCATGATAATATTGAAGCGATGCCGAGAAACACATTGCCATTACTGCTTGAATGACCTACCTACTGATGCAGTTCCTTGTAGATCTTGTTCAATACCACTATATTGCTCCCAGCAATGCCAGATACAGGCTGGTGGACAAATGTTCAATATTAATTCTGATGACCATGGCTTTTTTAACAGTCTTCCCAGTGATCTTGGGGCATATGTTACAGGCATTATATTAGGCAATGGTTCTAAACATGAGATTGAGGATATTCCTGAACATAAGCATGAGTGCCAAGGTGTACATTGGTCTACAGTATTACCATCTGAGATTGTTTTAGCAGGCCGAGTACTAGCAAAGTTTTTCCACAAAAGTGCATATGAAGATATTTCATTCTTTGTGAAAAGCCTGGAGCTTTTTCATTGTTATGCACAACTGCCATCTGATTGCAAGTTGGATTTACATATATATGCCATTATATTGCTATACTGTCTGCTACACTCTTGTGGTGCTAGGTTTTCCATGGATGGGGTCACTATGTCACAGGTTGTCATAATTTTTTCTCAAATCAAAGTGAATTGCATGACTGTTGTTCGTATAAGATCTATAGATGCTCATGGACTACATGATCAGTTTGGAAAATCTCTAGCCAGTGGATACTTGACGAGTAATGTGGAACAGGCCAGAGTGGGTAAAGCTATTTACAAAGATGGCAGCTTGTTCAACCATTCTTGCCAACCAAATGTTCATGCTTATTTTCTTTCACGTACCTTGTGTATACGGACAACAGAAGTTGTAGCAGCTGGATCTCAGCTGGAATTATCCTATGGTCCACAGGTTGGATTATGGGATAGTAAAGATCGCCAAGCCTTTCTGAAAGACGAGTACTCGTTTCAATGTCACTGTGGTGCCTGTTCAGAATTCAATCTATCTGACATTGTCCTCAATGCTTTTCACTGTGTCAGTCTAGATTGTTCTGGTGCAGTCTTGGACAGCAGAGTAGTTGACTGGGAAAGGCGGAAAATTAAGCACTTCCCTGGTGCTGACAAAGTTTATAAGAATGATGACATTTATAAAATCTGTCTTCGTTTATTCAACCAAAATGATGGCTACGCTCATATCCAGCCAGGTTACTGTTTGAGATGTGGTTCTTACCGTGATTTGGAGTCTTCAAGCACTGCAGTTGATAAAGCTTGGATATGCATCAAAAGATTGCAGGATGCAGTAACATCAAAAGAAATTTCAAATACTACTATTTCAGATGCATTAGAATCTCTTCGTATGCTGAGGTCATATTTGCATTCCTACAACAGGCATATTGCAGAGGCAGAGGACAGCCTTGCTCAGGCCTTTTGTACGGTGGGAGAATTACAATTAGCATTTGACCATTGTAAAGCATCTTTGCTGATTCTGGAAAAGCTATATAATCCGGATGATATTGTCATTGGTTTTGAGCTGGTGAAGCTTTGTTCCATTCAAATTTCCGTGGGTGACAAAACTGCACTGGAAAGCATAAATCGAATATGTGATATCTTCTCACGGACTCAAGGAAAGCTTTTCCAGCAAAATGAGCACGAAGATGTGAGATTTCTGTGCAGTGACTTCATCGGTGAAAGAATTCAACAAGCATCTTTTTTTCATATGGTTGCCATTTGTCTTCAGCTTGAGCAGTTTCAGCGAGGGGAGATTTTCGGGTAA 2460 0.4102 MTFDAQSRGVALEEMETLKAAIPESLKRMIGESTTDDLPTTCSSLHHFFLHFEPFHQMVSDLADPKNALCGKSEAAALESKQLGNHYFLREDYMMALNCYTKALRMAPLEAFGPERNLVAILYVNRATVLHKLNLLIECLRDCTRALQICPSYAKAWYRRGKANVSLGNHKDAICDLNVAKSMESSLSGKKQIESELKNILPQCEQASSVVQNEKNGLDTVDEMPQIKLQLITTPGKGRGMTLSCDISPASLVHREEPYAMIILKRCRETHCHYCLNDLPTDAVPCRSCSIPLYCSQQCQIQAGGQMFNINSDDHGFFNSLPSDLGAYVTGIILGNGSKHEIEDIPEHKHECQGVHWSTVLPSEIVLAGRVLAKFFHKSAYEDISFFVKSLELFHCYAQLPSDCKLDLHIYAIILLYCLLHSCGARFSMDGVTMSQVVIIFSQIKVNCMTVVRIRSIDAHGLHDQFGKSLASGYLTSNVEQARVGKAIYKDGSLFNHSCQPNVHAYFLSRTLCIRTTEVVAAGSQLELSYGPQVGLWDSKDRQAFLKDEYSFQCHCGACSEFNLSDIVLNAFHCVSLDCSGAVLDSRVVDWERRKIKHFPGADKVYKNDDIYKICLRLFNQNDGYAHIQPGYCLRCGSYRDLESSSTAVDKAWICIKRLQDAVTSKEISNTTISDALESLRMLRSYLHSYNRHIAEAEDSLAQAFCTVGELQLAFDHCKASLLILEKLYNPDDIVIGFELVKLCSIQISVGDKTALESINRICDIFSRTQGKLFQQNEHEDVRFLCSDFIGERIQQASFFHMVAICLQLEQFQRGEIFG 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2631 819 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 15 772 - -
Acco10g2631 819 Gene3D SET domain 443 530 IPR046341 -
Acco10g2631 819 SUPERFAMILY SET domain 229 558 IPR046341 -
Acco10g2631 819 ProSiteProfiles SET domain profile. 227 531 IPR001214 GO:0005515
Acco10g2631 819 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Acco10g2631 819 Gene3D Tetratricopeptide repeat domain 52 216 IPR011990 GO:0005515
Acco10g2631 819 Gene3D Tetratricopeptide repeat domain 536 786 IPR011990 GO:0005515
Acco10g2631 819 SMART tpr_5 77 110 IPR019734 GO:0005515
Acco10g2631 819 SMART tpr_5 695 728 IPR019734 GO:0005515
Acco10g2631 819 SMART tpr_5 154 187 IPR019734 GO:0005515
Acco10g2631 819 SMART tpr_5 120 153 IPR019734 GO:0005515
Acco10g2631 819 SUPERFAMILY TPR-like 78 724 IPR011990 GO:0005515
Acco10g2631 819 Pfam SET domain 476 531 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco10g2631 SET 1.5e-06 No_clan