Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2610 ATGCCCTTTCTAACATTCTGTCATTCGAAGTTGAGTCCTTCGTCAACTCTACAGCTTCCTTGTAACTGCATGAGAAGAATGGGTTTGATTACGCAATTTAAGTGTTCTGTAGTTAACAGAACATTGGCTTCTAGCTCTGTGGCTCCACCCGCATCCAAACCACACTCCCGCCGCTTGAACCGGAAACAAGGGCGTTCGTCTTCATTATACAGTCGTCCCAGTTTATCAGAAATGAACAAAGAGAGGATGGCAAACCGTGAGAAAGTTTATGCATTCTTGCGGGGGATTGGTATTGTTCCCGATGAGCTTGATGGACTGGAACTTCCTGTGACCGTCGAAGTTATGAGGGAACGAGTAGATTTTCTTCACAATTTAGGTCTTACAATTGAAGACATCAACAATTATCCATTAGTTCTTGGCTGCAGCGTCAAAAAGAATATGGTCCCTGTACTTGATTACCTTGGTAAATTGGGAGTCCGGAAATCTACATTTACTCAATTCTTGCAGAGATATCCACAAGTTCTTCATGCTAGTGTTGTCATTGACCTTGAGCCAGTGGTCAAGTATCTTCAAGGGATGGATATCAAGCCCAGTGATATTCCTCGGGTTCTTGAGACATATCCAGAAGTGCTAGGATTCAAGCTTGAGGGAACCATGAGCACATCAGTTGCTTATTTGGTTGGCATTGGTGTTGGAAGAAGGGAAATTGGAAGGGTTCTAACAAGATACCCTGAGATTTTGGGAATGAGAGTTGGTAGAGTAATCAAGCCTTTTGTAGAGTATCTGGAAAGCTTGGGAATTCCAAGATTAGCCATTGCAAGAATAATAGAGAAACGACCTTATATTCTTGGCTTTGGATTGGATGAGAAGGTGAAGCCGAATGTTGAAGCTTTTGAAGAGTTCAATATTAGAAGAGCATATCTGCCCTCTGTAATTGCGCAGTATCCTGATATCATGGGAATGGACTTGAGGCCAAGGCTTGAGAATCAAAGCAATTTACTTAAATCTTTACTTGATTTGGATTCTGAAGATTTTGGTAGAGTTGTTGAGAAGATGCCACAGGTAATTAGCCTCAGTAGTGCGCCTATGTTAAAGCATGTTAATTTCCTCAAGGATTGTGGGTTTTCCTTGCAACAAATGAAGAAGATGACTGTTGGATGCCCTCAACTTCTCGCTTTAAACATTGACATCATGAAACTTAGCTTTGATTACTTTCAAAAGGAGATGGGGAGGCCTTTAGAAGACTTGGTTGCTTTCCCAGCCTTCTTTACATATGGTCTGGAGTCAACTGTAAAACCCAGGCATAAGATGGTTTTGAAGAAGGGAGTGAAGTGTTCCCTTGCATGGATGCTTAATTGCTCAGATGACAAGTTTCAGCAACGAATGGATTATGACACTATTGAGATTGAGGAAATGGAAATGGGACCATCATTTGACATGAATTCACTGATGGAACCAAGGAGTGACGAGTCAGCTTCTGATTATGATGACAGTGATGATGACGAGGAGGAGGAATAG 1518 0.4183 MPFLTFCHSKLSPSSTLQLPCNCMRRMGLITQFKCSVVNRTLASSSVAPPASKPHSRRLNRKQGRSSSLYSRPSLSEMNKERMANREKVYAFLRGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTQFLQRYPQVLHASVVIDLEPVVKYLQGMDIKPSDIPRVLETYPEVLGFKLEGTMSTSVAYLVGIGVGRREIGRVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAIARIIEKRPYILGFGLDEKVKPNVEAFEEFNIRRAYLPSVIAQYPDIMGMDLRPRLENQSNLLKSLLDLDSEDFGRVVEKMPQVISLSSAPMLKHVNFLKDCGFSLQQMKKMTVGCPQLLALNIDIMKLSFDYFQKEMGRPLEDLVAFPAFFTYGLESTVKPRHKMVLKKGVKCSLAWMLNCSDDKFQQRMDYDTIEIEEMEMGPSFDMNSLMEPRSDESASDYDDSDDDEEEE 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2610 505 MobiDBLite consensus disorder prediction 46 80 - -
Acco10g2610 505 FunFam Transcription termination factor mterf4, chloroplastic 115 252 - -
Acco10g2610 505 MobiDBLite consensus disorder prediction 475 505 - -
Acco10g2610 505 SMART mt_12 346 376 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 SMART mt_12 381 412 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 SMART mt_12 66 99 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 FunFam Transcription termination factor MTERF4, chloroplastic 253 467 - -
Acco10g2610 505 Pfam mTERF 151 459 IPR003690 GO:0003690|GO:0006355
Acco10g2610 505 Gene3D Transcription termination factor 3, mitochondrial 255 468 IPR038538 -
Acco10g2610 505 Gene3D Transcription termination factor 3, mitochondrial 131 254 IPR038538 -
Acco10g2610 505 PANTHER CGI-12 PROTEIN-RELATED 150 462 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2610 Acco-ChrAcco10 36927559 36929076 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco10g2610 mTERF 1.4e-107 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2610 10 36927559 36929076 Acco10g2610 10 36927559 36929076 ECH