Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2594 ATGGGTGATTTGAGAGCAGTGGAAGCGAAGGAGAGCGAGAAGGAGAAGGAGAGAACAGGGGACGAGGATGAAAGTGGAACAGAGAGTATAGGGACAGAATTGAATGGTCTGATGAGGTGGGAGAAATTCTTGCCCAAGATGATATTGAGAGTTCTCTTGGTTGAAGCTGATGATTCCACCCGCCAGATTGTCGCTGCGCTTCTTAGGAAATGCAGTTATAGAGTGGCTGCTGTTCCTGATGGCCTGAAAGCTTGGGAAATACTGAAGGGAAGATCACACAATATCGATCTAATACTGACAGAAGTAGATTTGCCTTCCATATCTGGCTATGCGCTTCTCTCCTTAATCATGGAGCATGAGATTTGCAAAAGCATTCCTGTTATAATGATGTCCTCACAAGATTCAATTAGCACAGTATACAAGTGCATGTTGAAAGGTGCTGCTGACTATCTTGTTAAGCCCATTAGAAAAAATGAGCTAAGGAATTTGTGGCAGCATGTTTGGAGAAGGCAATCGTCAATAATCGGTTTAAATGATCTTCAAGATGAGAGTGTTGGCCAACAGAAGGTTGAAGCCACTGCTGAAAATAATGCTGCTAGTCCTTCAAGTGGAGATGCAGCAAGCATTCAAAAAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCCTGTACAAAGCCTGATTTGGAAGCTGAAAGTGCCCCTATGGAAAATGTTGAGGAATTTTCTCATCTAAGATCTGGTGACTCGTATCCGAGTGATGAAAAGATTCAGGAGGTTGGAGCTAGTATTCGTTTAGGCCACACATCAATTTTGCATGATAATCATGCTGGAGGATCAACTCCGGGTTTCTGCACAAATGGTAGGACTAGCACAACTCATGGCACGGATGGCATTCCAGAGAATAGGAGTGCTAGTATCAGTGTTGAAGCTCATGATAATCACTATGTTCAAATTAGCTCTTCCAAGGAAGCTATTGATTTGATAGGAGCATTTCATGCACATTCAAAATGCAGTCCCAAAAGTTCCACAATCAATTGTGCGGGAATGTTTGACTTCTTTCCACGGTTAGATCTTTCCTTAAGAAGAGAACCCAGCAGCTTTGAGAATGAAGTTTCCAAAGACAGGCAAACCCTCACACATTCCAATGGCTCAGCTTTCAAACGGTATACCAGCGGACAATTTCAAGCACCACCAGCAGGTCTCATTAACTTTTGTGATCTAGAAAGAGAACAGAGAACAAATTGTGAGAAAAATAACTCTTATGTTGCTACTGGCTGTAACTCAGATAGTTCAACACCGAGTATGCAAAGAAGTATCGTGTCACCCACGACACCCCAATCTAGAGAATCTAAACTCGCATCTTCATTCTCCCAGCAGCCGCATTCTCTCCCGATTCCAGTAAGAGGAATAAGGTTCAATGACCTGTGTAGAACCTATGGTTCTGTCCCTCGTCCAATGTTTGGTACACAGTCTGATCAACCATCAATGCCAAGTCCAAGATCTGCTGTGCACCTGGAATCTACTGTTCAAGCGAATGCGTATTATCCGTCTAATGTCAAAGAGAATGATTCAGAGCAGCTTTATGAAGCTCGAGGTCAAAGTGGAAACAACCTTGGAAGCCACATTGTTTGTGTGCAGGAACACAAGCTGGAACATGTGGAAGATCGAGGACACATTTCCCCTGCAACTGATCAGAGTGGAAGCAGTAGTTTCTGCAAGGGAAATTTGAGTCGAATGAACAGCATTGGCTACGGAAGCAACTGTAGAAGTAATAGCAATGTTGATCAGGCTGTCATAGTCAGGACTGCTTCAGAGGTGAAGAATCACGAAGACCTCTCAAACATTGCAAATTGTCACCGATCCATCCTAAGAGAAGCAGCTCTAAACAAGTTTCGTTTGAAAAGGAAAGAGAGATGTTATGAGAAGAAGGTTCGGTATGAAAGCAGAAAGAAACTGGCAGAGCAGCGTCCCAGGGTGAAAGGACAATTTGTTCGTCAATTGCACCCTGAACCCCTGGCTGCAGATAAAGACGGCTGA 2046 0.4345 MGDLRAVEAKESEKEKERTGDEDESGTESIGTELNGLMRWEKFLPKMILRVLLVEADDSTRQIVAALLRKCSYRVAAVPDGLKAWEILKGRSHNIDLILTEVDLPSISGYALLSLIMEHEICKSIPVIMMSSQDSISTVYKCMLKGAADYLVKPIRKNELRNLWQHVWRRQSSIIGLNDLQDESVGQQKVEATAENNAASPSSGDAASIQKNKELIEKGSDAQSSCTKPDLEAESAPMENVEEFSHLRSGDSYPSDEKIQEVGASIRLGHTSILHDNHAGGSTPGFCTNGRTSTTHGTDGIPENRSASISVEAHDNHYVQISSSKEAIDLIGAFHAHSKCSPKSSTINCAGMFDFFPRLDLSLRREPSSFENEVSKDRQTLTHSNGSAFKRYTSGQFQAPPAGLINFCDLEREQRTNCEKNNSYVATGCNSDSSTPSMQRSIVSPTTPQSRESKLASSFSQQPHSLPIPVRGIRFNDLCRTYGSVPRPMFGTQSDQPSMPSPRSAVHLESTVQANAYYPSNVKENDSEQLYEARGQSGNNLGSHIVCVQEHKLEHVEDRGHISPATDQSGSSSFCKGNLSRMNSIGYGSNCRSNSNVDQAVIVRTASEVKNHEDLSNIANCHRSILREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQLHPEPLAADKDG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2594 681 MobiDBLite consensus disorder prediction 218 239 - -
Acco10g2594 681 Pfam CCT motif 627 669 IPR010402 GO:0005515
Acco10g2594 681 SUPERFAMILY CheY-like 49 178 IPR011006 -
Acco10g2594 681 CDD psREC_PRR 51 154 - -
Acco10g2594 681 Gene3D - 47 257 - -
Acco10g2594 681 ProSiteProfiles Response regulatory domain profile. 50 168 IPR001789 GO:0000160
Acco10g2594 681 SMART REC_2 49 164 IPR001789 GO:0000160
Acco10g2594 681 PANTHER TWO-COMPONENT RESPONSE REGULATOR 50 233 IPR045279 GO:0009736
Acco10g2594 681 ProSiteProfiles CCT domain profile. 627 669 IPR010402 GO:0005515
Acco10g2594 681 MobiDBLite consensus disorder prediction 1 25 - -
Acco10g2594 681 MobiDBLite consensus disorder prediction 1 30 - -
Acco10g2594 681 MobiDBLite consensus disorder prediction 428 463 - -
Acco10g2594 681 Pfam Response regulator receiver domain 51 162 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2594 Acco-ChrAcco10 36841186 36845692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2594 251 671 Response Regulator Gene Family AT5G24470 28.381 4.42e-26 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Acco10g2594 Response_reg 2.2e-21 CL0304