Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2584 ATGCGAGCCTCTCTATGCCCAAAGGCTATATTCTATTCACCTGGATTGCCTTCATTTTGTGGGGTTGATACAACAACACGGTCGCTTTGTTTCTTCAAGAAGCAGACAGTCAAGCTCTTTTTCGTTGCTTTGCTTGGCCGTAATTTCTCTGCGTGGGCCGTGGGCATGTCACAGCAAAGCCCAGATAAGATGGCGAGTCCGAAAAACGCCAGACGAGTTGGTGACACAACCTACACCAAGATCTTCGTTGGGGGACTGGCCTGGGAGACTAAAAGAGACACTCTCAGACACTGTTTTGAGCAGTTTGGAGAGGTCTTAGAGGCTGTTGTTATACACGACAGAAACAGTGAAAGATCAAAAGGCTATGGCTTTGTGACGTTCAAGAGCCCAGATTCTGCAACAAGAGCCTGCCAGAATCCCTATCCTGTGATTGATGGGAGGAGAGCTAATTGTAATCTCGCAGCTCTTGGTTCAAAAAGATTCAATGCATACCCAAAAGTTGCAGGAAAGGAGAAATTTAGTACAAGTTCTTGGCCTATGCTTTCAGTTCCAAGTCAAGAAATCCCCTCCTATTACAATCAACACATACCCCAGTATGCGTTTCCTTATCCACCACTCGGGTACCCTGGATATCCGCCTACACAAGAAATTTACGCAATGAACTATTATAATGTCTATGGAGGACAGCAAATTCCGATTCGTTGGCCTTCGGTATATTATCAGCCGTATAATGGGGTTGGACAGTTGGTTGCACCAGCATATTTTAAAAAAGCACAATTCCCAGAGCCTTCATCTCAGGAATTGTTACCCACCACAGGAACAGGGGGTGCTGCAGGAATGGTCGGAGCCTCCCCTGAGCAGAAATCTTGA 870 0.4621 MRASLCPKAIFYSPGLPSFCGVDTTTRSLCFFKKQTVKLFFVALLGRNFSAWAVGMSQQSPDKMASPKNARRVGDTTYTKIFVGGLAWETKRDTLRHCFEQFGEVLEAVVIHDRNSERSKGYGFVTFKSPDSATRACQNPYPVIDGRRANCNLAALGSKRFNAYPKVAGKEKFSTSSWPMLSVPSQEIPSYYNQHIPQYAFPYPPLGYPGYPPTQEIYAMNYYNVYGGQQIPIRWPSVYYQPYNGVGQLVAPAYFKKAQFPEPSSQELLPTTGTGGAAGMVGASPEQKS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2584 289 PANTHER BOULE-RELATED 61 263 - -
Acco10g2584 289 SMART rrm1_1 80 152 IPR000504 GO:0003723
Acco10g2584 289 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 81 138 IPR000504 GO:0003723
Acco10g2584 289 MobiDBLite consensus disorder prediction 264 289 - -
Acco10g2584 289 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 79 156 IPR000504 GO:0003723
Acco10g2584 289 SUPERFAMILY RNA-binding domain, RBD 69 154 IPR035979 GO:0003676
Acco10g2584 289 CDD RRM_RBM24_RBM38_like 79 154 - -
Acco10g2584 289 Gene3D - 53 166 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2584 Acco-ChrAcco10 36797494 36799575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2584 75 213 C2H2 Transcription Factor Family AT2G19380 28.481 3.95e-14 70.5