Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2582 ATGGGGAAGGCAGGAGGAAGCTCTTGGTTGGCAACTGTGAGAAGGGCTTTCAGATCTCCCACCAGAGAAAAGGGCAAGAAAAGCAGCAGGACTAGAGAAGAGCACGAACAAGAGGAGGAGGAAAAGGCACGATACCCTCTCAAACTCTTGCTTCATTTTGAACTTAATTTGTACACTCTACAACACGAGTTCTTTTTTTTTTTTTTGGTCATTAAGGTAAAAGAAGGTGTGTTTTTCTTTAATGTGCAGAAGAGGGGGAAACGTAGATGGATCTTCGGAAGCCCCTTTAGCCAAGAGACAACAAGCCTGCATTGCGAAGAAAGAACCATAACAAGTGTAGCTGATGCAACGACATCAAGTTATGATGCAGAGCAACAAAGGCATGCGATTGCAGTAGCCATGGCAACCACAGCGGCTGCTGAGGCGGCGTTAGCCACCGCTCAAGCAGCTGTGGAGGTTGTTCGCCTTTCTAAGCCTTCCTTCTTTGTCAGAGAACATAACGCAGCCATTGTAATCCAAACAGCTTTCAGAGGCTATCTGGCGAGGAGAGCTCTTGGGGCACTTAAAGGGTTGGTGAAGCTGCAAGCATTAGTGAGAGGCCATAATGTACGAAAACGAGCTAAACTAACATTGGAGTGCATGCAAGCTCTCATTCGAGTTCAAACTCGAGTGTGCCAACAGCGAGCCAAGAGGCTCTCACAACATGAAACAGCCACAGATTCCACAGACGAGCGTGGGACAGATCAGCAAGTGTGGATGCGCTGGGATGACCGCCCTCGAACGGTTCATAACATTCGAGCTCTTCTACAGAGAACAGAGGAAGTTTCCTTTAGAAGTGAAATGTCCCTGGCTGATGCCTTCTCTCATCAGATATGGACAACTGGTAGAGAAGCATGCGCCAGCGAGGAAGAGGTAGAAGACAGAGACGGCTCCACGTGGAGGAGAAGATGCAGAGAGGACAGAGCCAGAACTTCGCGTGGTCCAAGAGACGCCATCAAAATAGTTGAAATCGATGCATACAGTCCTTACTCTAACCATGTTTTCGCTGATAAGGAGAGATCATATGGTGGGTATAAACCTGAGTTCATTAAACCACCGAGACTTTCATTTTCTTCGCCTAATAGAGCCCACTACGAGATCTCAATGGCAACGACACCCCCGTCAATGAGGATGAAGCACGTTGAGATGATTTCAGCTGAAAAGTCCAATGCTTTGATGCCAAACTATATGGCAGCCACAGAATCTGCGAAGGCTCGTTCTCGCCCACAAAGCATCCTCAGACACAGGATTTCAACCCACGAGAAGGATAAAATGGGATCCATCAAGAAACGCCTTTCATTCTCAGCTCCTAATTCTTGTGATGGTGTCGACACTTGA 1377 0.4749 MGKAGGSSWLATVRRAFRSPTREKGKKSSRTREEHEQEEEEKARYPLKLLLHFELNLYTLQHEFFFFFLVIKVKEGVFFFNVQKRGKRRWIFGSPFSQETTSLHCEERTITSVADATTSSYDAEQQRHAIAVAMATTAAAEAALATAQAAVEVVRLSKPSFFVREHNAAIVIQTAFRGYLARRALGALKGLVKLQALVRGHNVRKRAKLTLECMQALIRVQTRVCQQRAKRLSQHETATDSTDERGTDQQVWMRWDDRPRTVHNIRALLQRTEEVSFRSEMSLADAFSHQIWTTGREACASEEEVEDRDGSTWRRRCREDRARTSRGPRDAIKIVEIDAYSPYSNHVFADKERSYGGYKPEFIKPPRLSFSSPNRAHYEISMATTPPSMRMKHVEMISAEKSNALMPNYMAATESAKARSRPQSILRHRISTHEKDKMGSIKKRLSFSAPNSCDGVDT 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2582 458 Gene3D - 163 216 - -
Acco10g2582 458 ProSiteProfiles IQ motif profile. 189 216 IPR000048 GO:0005515
Acco10g2582 458 ProSiteProfiles IQ motif profile. 165 193 IPR000048 GO:0005515
Acco10g2582 458 SMART iq_5 164 186 IPR000048 GO:0005515
Acco10g2582 458 SMART iq_5 187 208 IPR000048 GO:0005515
Acco10g2582 458 MobiDBLite consensus disorder prediction 434 458 - -
Acco10g2582 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 208 IPR027417 -
Acco10g2582 458 Pfam IQ calmodulin-binding motif 192 208 IPR000048 GO:0005515
Acco10g2582 458 Pfam IQ calmodulin-binding motif 166 184 IPR000048 GO:0005515
Acco10g2582 458 PANTHER IQ-DOMAIN 5-RELATED 1 448 - -
Acco10g2582 458 MobiDBLite consensus disorder prediction 1 39 - -
Acco10g2582 458 MobiDBLite consensus disorder prediction 17 39 - -
Acco10g2582 458 Pfam Protein of unknown function (DUF4005) 382 454 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2582 Acco-ChrAcco10 36775808 36777368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2582 1 450 IQD Protein Family AT1G01110 33.716 1.95e-57 196