Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2581 ATGGGTGAATTTGGCGTTTGGGACAAGGAAGCCGCAAAAAATAGCAGCAATGGTACTGTTGGGTTGGGTATGAAGGTGCAGAAGCAGAAGCTTGAAGCATTCCCTAGTAAGAACATGATGATGATGGTTCCCCCTCCTCATAATCATCACGATCCTCCACTATATGGTCCCTCCTTTGCTGCTCCTGGTGATGGTGATGGTCCTACAACTTGTAAGTCCCTCACTAATTATACAAACCATTTTGTTCATGCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGGTGCTGCCCTTGTTAGACCCTTGCAGTTGCAGCCTCTTCACGTGTCTGCCTCTACCGCCTTCAAATCCTCAGGAGGGTTGATGGCAGCTTCCCTGGGATTTCCTTTCACAAAAGCACAGTGGAAGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCTTCTATTCCTGTTCCTCCTTATCTGCTTATCCCTGTGCCGCCTTCTTGCTCTCCCTCGGATACCGATTTGAATCTAAGGTTTTCAAGCAGTAGTGACGCAGAGCCTGGGAGGTGCAGAAGAACAGATGGGAAAAAATGGAGATGTTCAAGAGACGTAGCCCCTAACCACAAGTATTGCGAACGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCATGTGGAAATTCAAGCCACCACCAACAATAATCAGCAAATCAGCAGAACTAGCCAAGATTATCCTTCTTTATCTACTACTATGACTATCTCTAACTCCACAATCCGTAAGAACGGATCTTCATCTCCGTTTCTTGCGTCTGCCACCACCTGTCAGCCATACTTTGAATCTTCCCTTTCTATTGATAAGCTCGGCATCAAAGCTGCAAATTTTAATTCCCCCGCTTCTGTTCCCAGAGGCGGGGACTGGATGCTGAAAGGAGACCCTAATCCCATGGATCCTCAATGGCATCATCTGATACAGAACAAACTCGGATTGAACACGGGAAGTTCCGGTAACAAGGACGCCTCAATTTCAATGACTCGTTCCATAGGCCTTCTGTATACGAACTCGTATGATGTTTTCAGTTCTGAACGAGACCAACACAACAAGCGGTCTCCTTTATACCTCAATTCTCTTGCAGTTCCTATAGAAAATGGTCGATCTGTAAAGCCAAGAGCTTCCATTGATGCTTGGTCGAGTGCAGAAATCAATGCCAACAAAAGGAGCTCTGTTGCTGCATCGAATAACAAGTTATCACTTCCTTCTCTTGATTTGTCAGTCGGTGGGGCTGTGGAGGAAGACATGGGTTCTGTTCAATTGGGCTTGGGCCAAATGGATCCCCCATCGAATTGGGCCTCATGTTCAACTCCTGGGGGCCCACTAGCGGAAATGTTGAGGCCCAGCAAGGTGGTGACCAGCACCAGTGAGACCGCGAGGGCAACAATGGGGTCATCTCCATCTGGGGTGCTGCAGAAGACGCTTGCTTCATTTTCTGATAGTAGTAGCAGTAGCAGCCCGAGGCCGAGGGGTGGGACTTCCAGGGTCACTTCTGATATGGCCTTGTTCTGCTTTAATCATGCCAAACTACCTTCCTAG 1584 0.4779 MGEFGVWDKEAAKNSSNGTVGLGMKVQKQKLEAFPSKNMMMMVPPPHNHHDPPLYGPSFAAPGDGDGPTTCKSLTNYTNHFVHAASASASASASGAALVRPLQLQPLHVSASTAFKSSGGLMAASLGFPFTKAQWKELERQAMIYKYMMASIPVPPYLLIPVPPSCSPSDTDLNLRFSSSSDAEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKHVEIQATTNNNQQISRTSQDYPSLSTTMTISNSTIRKNGSSSPFLASATTCQPYFESSLSIDKLGIKAANFNSPASVPRGGDWMLKGDPNPMDPQWHHLIQNKLGLNTGSSGNKDASISMTRSIGLLYTNSYDVFSSERDQHNKRSPLYLNSLAVPIENGRSVKPRASIDAWSSAEINANKRSSVAASNNKLSLPSLDLSVGGAVEEDMGSVQLGLGQMDPPSNWASCSTPGGPLAEMLRPSKVVTSTSETARATMGSSPSGVLQKTLASFSDSSSSSSPRPRGGTSRVTSDMALFCFNHAKLPS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2581 527 Pfam WRC 183 225 IPR014977 -
Acco10g2581 527 MobiDBLite consensus disorder prediction 466 511 - -
Acco10g2581 527 ProSiteProfiles QLQ domain profile. 129 164 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco10g2581 527 PANTHER GROWTH-REGULATING FACTOR 5 106 394 IPR031137 GO:0005634|GO:0006351|GO:0032502
Acco10g2581 527 Pfam QLQ 129 162 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco10g2581 527 ProSiteProfiles WRC domain profile. 182 226 IPR014977 -
Acco10g2581 527 MobiDBLite consensus disorder prediction 466 508 - -
Acco10g2581 527 SMART QLQ_2 128 164 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2581 Acco-ChrAcco10 36772403 36774916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2581 391 498 GRF Transcription Factor Family AT5G53660 37.324 1.74e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Acco10g2581 WRC 2.6e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2581 10 36772403 36774916 Acco10g2581 10 36772403 36774916 ECH