Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2567 ATGGCCGGTTCTTCCAAGACTAAGTTCGTTCAAGATTTGTTCTTGTACGCGGCGAGTGCGGCACTCAGTTGTTTGGTTTTGTTCTCTGGGTTTCGACGCCTCGACTCTAATCGTGGGACCTCCAAGAAAGCTCTTCAACGCAAAAAAGACATAGCCAAGCGTCTCGGTCGTCCTGTCATTCAAACAAACGCTTATGAGGATGTCATAGCCTGTGATGTTATTAATCCTGACCTGATTGATGTGGAGTTTGACTCTATTGGGGGACTGCAAAAGATCAAGCAATCTTTGTTTGAGCTTGTTATATTGCCGCTACAACGACCAGAATTATTTTCTCACAGCAAACTTCTTGGCCCACAAAAGGGGGTCCTGTTGTATGGGCCCCCTGGTACTGGGAAAACCATGCTTGCCAAAGCTATTGCAAAGGAATCTGGATCAGTCTTCATTAATGTAAGGATGTCAAACCTGATGAGCAAGTGGTTTGGTGATGCCCAGAAACTTGTGGCTGCCATATTTAGCCTGGCTTGTAAGCTCCAGCCTGCTATCATATTCGTTGATGAAGTTGACAGCTTTTTGGGTAGGCGTCGTAAAACAGATAATGGGCCAGTGTTAACCATGAAAACTGAGTTCATGACATTATGGGATGGATTTACCACCAATCAGAAAGCTCGAATTATCGTTCTTGGAGCAACCAATCGTCCCGCGGAACTTGATGAGGCCATATTAAGGCGGTTTTCTCAATCCTTTGAAATTGGACCTCCAGACCAAAGGGAGAGGGCTGAGATATTGAGGATTATCTTTGCGGGTGAGAGAATTGATGACAACATTGACTTTGATCATATAGCTTCCTTGTGTGAGGGATATACTGGTTCAGATTTGTTTAACCTCTGCAAGAAGGCTGCTTATTTTCCCATTAGGAAACTGCTAGATGAAGAAAAGCGAGGGAGAAATGCTCCTGAACCAAGGTGTTTGACACAGTCAGACTTGGAGGAGGCTCTCGCCACTTCACAGAGAACGGAGGTTGCAGCTACTGAATACAGAAGATTAAATGTACAGTCAACAAGGGCAAGAAGGCCAGGACGCGGAGATTCAGGTGATTATGAGTTTAAAGATGCAATCAATGAACTCTGTAAGATTGTGGTTTCTCAAATTATTAGCCTCCAATCAGGTGCGCAGGATCCGTGA 1182 0.4475 MAGSSKTKFVQDLFLYAASAALSCLVLFSGFRRLDSNRGTSKKALQRKKDIAKRLGRPVIQTNAYEDVIACDVINPDLIDVEFDSIGGLQKIKQSLFELVILPLQRPELFSHSKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGSVFINVRMSNLMSKWFGDAQKLVAAIFSLACKLQPAIIFVDEVDSFLGRRRKTDNGPVLTMKTEFMTLWDGFTTNQKARIIVLGATNRPAELDEAILRRFSQSFEIGPPDQRERAEILRIIFAGERIDDNIDFDHIASLCEGYTGSDLFNLCKKAAYFPIRKLLDEEKRGRNAPEPRCLTQSDLEEALATSQRTEVAATEYRRLNVQSTRARRPGRGDSGDYEFKDAINELCKIVVSQIISLQSGAQDP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2567 393 Gene3D - 253 335 - -
Acco10g2567 393 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Acco10g2567 393 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Acco10g2567 393 SMART AAA_5 118 254 IPR003593 GO:0016887
Acco10g2567 393 Gene3D - 80 338 IPR027417 -
Acco10g2567 393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 310 IPR027417 -
Acco10g2567 393 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Acco10g2567 393 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 29 340 - -
Acco10g2567 393 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Acco10g2567 393 Pfam AAA+ lid domain 274 309 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2567 Acco-ChrAcco10 36678428 36681075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2567 116 318 Calmodulin-binding Proteins AT3G56690 34.951 1.68e-35 136