Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2566 ATGGTTTGGGTTTGGACTACCTCCATCTCTTCCATTTTCTTCGCCCTTCTTCTCTCCCTGCTAATCCTTCGCTTCTTCCACAAAATTTCCCTAGTATATATTCTTCAGAGATGGTGGTTTGCCCTTCAAAACCACCTCCATATTCACCAGTCCTTCAAAATCCCACTCTACAAAGAGCATTACCAGGAAAATCAACTTTACCATAAAACTCTCACGTACCTTAACTCACTGCCTGCCGTAGAAGACTCTGACTTCCCTAAACTCTTCTCTGGTTCCAAACCTGGTGAAATTTTACTTTATCTAGATGCTAACCAGCCGGTGGGCGACGCTTTTCTCGGAGCCAGAGTCTCCTGGACAAAGGAAAAACCCGAAGGAGATGTTAATTCTGTACTGGTACTCAGAATCAAGAAGAAAGACAAACGCAGAATTTTCCGTCAATACTTCCAGCACATCCTCACGGTGGCGGATGAAATCGAACAGAAGAGAAAAGAGATTAGGTTGTACGTGAACTCTGGAAGTGACGAGAACTCACGGTGGCGGTCGGTTCCATTCACCCATCCGGCGAGCTTCGACACGGTGGTGATGGATGCCGAGCTGAAGAACAAGGTCAAATCCGATCTCGAACTGTTTCACAAGTCCAAGCAGTACTATAACCGGTTGGGCCGTGTTTGGAAACGGAGCTACCTTCTCTACGGGGCGCCCGGAACGGGGAAATCTAGTTTTATCGCAGCAATGGCAAGGTTCCTGAGTTATGACGTCTACGATATAGATATCTCCAAAGTTTCGGACGACTCCGATTTGAAGATGCTACTGTTGCAGACAACGAGTAAGTCGGTGATTGTCATCGAAGAGCTCGATAGATTCCTTGCAGTGAAATCAAAGGCCGTGAGTCTGTCGGGTATGCTAAACTTCATGGACGGAATTATATCATGCTGTGGGGAGGAACGAGTGATGGTGTTTACGGTGAACGAGAAAGATGAAATCGATCCGGCGGTACTGAGACCGGGAAGGATTGACGTTCACATACACTTCCCCTTATGCGATTTCTCCACCTTCAAGATTTTAGCCAGTAGTTATTTGGGGGTGAAGGATCACAAGCTTTTCCCGCAGGTGGAGGAGGTTTTTCAAGCCGGGGCCAGGATGAGCCCGGCCGAGATCGGTGAAATCATGATCTCCAACCGAAATTCACCCAGCCGGGCCTTGAAAACCGTCATCACAGCCCTCCAAATCAACGGCGGTGACGGGAGGAGGGGCCAGAGGTCGGCCGACGGCGGGGAGTTGGGACAGCCTGACGGAGTTGTAATGCACGAGAGTGGACACACGATGAGGGAGCTGCGAAAGCTGTATGGGCTTTTGCGTCTGGGAAGTAGAAGAAAAGACGATCATTCTGGGCCCATAGAAAAAGAGGACCCACAGATCCAAGCATAG 1428 0.4909 MVWVWTTSISSIFFALLLSLLILRFFHKISLVYILQRWWFALQNHLHIHQSFKIPLYKEHYQENQLYHKTLTYLNSLPAVEDSDFPKLFSGSKPGEILLYLDANQPVGDAFLGARVSWTKEKPEGDVNSVLVLRIKKKDKRRIFRQYFQHILTVADEIEQKRKEIRLYVNSGSDENSRWRSVPFTHPASFDTVVMDAELKNKVKSDLELFHKSKQYYNRLGRVWKRSYLLYGAPGTGKSSFIAAMARFLSYDVYDIDISKVSDDSDLKMLLLQTTSKSVIVIEELDRFLAVKSKAVSLSGMLNFMDGIISCCGEERVMVFTVNEKDEIDPAVLRPGRIDVHIHFPLCDFSTFKILASSYLGVKDHKLFPQVEEVFQAGARMSPAEIGEIMISNRNSPSRALKTVITALQINGGDGRRGQRSADGGELGQPDGVVMHESGHTMRELRKLYGLLRLGSRRKDDHSGPIEKEDPQIQA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2566 475 Gene3D - 344 408 - -
Acco10g2566 475 Pfam ATPase family associated with various cellular activities (AAA) 229 346 IPR003959 GO:0005524|GO:0016887
Acco10g2566 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 407 IPR027417 -
Acco10g2566 475 SMART AAA_5 224 348 IPR003593 GO:0016887
Acco10g2566 475 PANTHER BCS1 AAA-TYPE ATPASE 44 416 - -
Acco10g2566 475 Pfam Domain associated at C-terminal with AAA 35 119 IPR025753 -
Acco10g2566 475 Gene3D - 180 343 IPR027417 -
Acco10g2566 475 MobiDBLite consensus disorder prediction 412 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2566 Acco-ChrAcco10 36673395 36674822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2566 220 344 Calmodulin-binding Proteins AT3G56690 27.338 5.20e-08 53.5