Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2540 ATGCCACCCTCACTATGTAAAGCTTCTACCCAACCAGTGATCCAAAACACCATTTTCCTTTCAGAGTGTTTTGTTAAGAGGCCGATCTTCTCGCCGGAGATGGGGAAGAAAGGAGGCGGATGGTTCTCGTCAGTGAAGAAAGTTTTCAGATCGTCTTCTAATAAGGACTCGTCGGCGCCGGCCAGGAAGAAGGATAATGAAAGGAGACAGCCTGAAGCGGCAGAGGTTGTGCCTTTTGAGCATTTTCCTCCGGAGAGTTCACATGATGACGTCACCAATGAGAACAGTATAGCATCCACGCCCGTGACCGAAGATAGAAATCATGCCATCGCGGTGGCAGCGGCCACAGCCGCCGCTGCAGAAGCTGCAGTTGCGGCGGCACAAGCAGCAGCGAGAGTTGTTCGACTGGCAGGTTATGGACGCCACACTAAGGAAGAAAGAGCAGCAACTCTCATCCAATCATACTACAGAGGCTACCTAGCTCGACGTGCACTGCGTGCGTTGAAGGGATTGGTGAGGCTGCAAGCACTTGTAAGGGGGCATAATGTACGAAAGCAGGCACAAATGACCATGCGATGTATGCAAGCATTGGTTCGGGTACAGGCAAGAGTAAGAGCTCGCAGATTCCAGTTGACCCACGAGCAGCTTCGCAAGACAGAGGAGGAGTACGAGGAGAGGGAATTTGAGGAACATGTAGTGCCCAAGCCTATGAGCCCTATGAAAAGGACTGATCTGAGCAGGTGGGACAATGGGCATCACAGCAGCCAGAAAATCCAGGAAAATGAGGCCAGAAAACACGAGGCTGTAATGAAGAGGGAAAGAGCTCTTGCTTACGCTCTCAACTGTCAGCAGCAACAGCAGAAGCCGTTTCTGCACTTGGACTCCAATGACGATGATGTTGGAGCCATCAAGTACCACGACGAGCGTGAAAAGACGCCGTGGGGTTGGAACTGGCTGGACCGTTGGATGTCATCACAACCGTACAATGTCAGGAGCGTGGGGCCGCGTGAGACTTCTTATATGACCCTTGCCACCACAGCCACCACCACCACCGACGACATGTCTGAAAAGACGGTGGAGATGGACATGGTGGCACCTTTAGTCTCAAGCAACGTCAGCGCTATGGGGCTAATGAACCAGGAGTTTCTTGATTCAAGCCCCATGTCCAACAGAAAACACCACCGGCAATTCAGTTTCAATGTGCCCAGCTACATGGCTCCCACTCAATCAGCAAAAGCTAAGGTAAGAGGTCAAATGCAGATAAAGCCACGTGGCTCACCTGGGCCCCAGTGGAACTCGTCCACAAAGAAAGGGCCGGGTATCGGATCGGTGTGTGATTCTTCAAGCTCTGGAGGAGGAACATCCAGTTACAAGTTCCCGAGGAGCCCAAGCCCAAAAATGACTGGGAGCCGCCCGCAGTCTAGGCGGATCACAGGGAGCAGCCCAGATTATTCTGGGTTCGAGGATTGGGCACTTCCTCTTGGAGGCCATGGTTGGGCATGA 1503 0.5263 MPPSLCKASTQPVIQNTIFLSECFVKRPIFSPEMGKKGGGWFSSVKKVFRSSSNKDSSAPARKKDNERRQPEAAEVVPFEHFPPESSHDDVTNENSIASTPVTEDRNHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHTKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRFQLTHEQLRKTEEEYEEREFEEHVVPKPMSPMKRTDLSRWDNGHHSSQKIQENEARKHEAVMKRERALAYALNCQQQQQKPFLHLDSNDDDVGAIKYHDEREKTPWGWNWLDRWMSSQPYNVRSVGPRETSYMTLATTATTTTDDMSEKTVEMDMVAPLVSSNVSAMGLMNQEFLDSSPMSNRKHHRQFSFNVPSYMAPTQSAKAKVRGQMQIKPRGSPGPQWNSSTKKGPGIGSVCDSSSSGGGTSSYKFPRSPSPKMTGSRPQSRRITGSSPDYSGFEDWALPLGGHGWA 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2540 500 MobiDBLite consensus disorder prediction 52 75 - -
Acco10g2540 500 Coils Coil 206 226 - -
Acco10g2540 500 MobiDBLite consensus disorder prediction 408 500 - -
Acco10g2540 500 ProSiteProfiles IQ motif profile. 169 196 IPR000048 GO:0005515
Acco10g2540 500 MobiDBLite consensus disorder prediction 57 75 - -
Acco10g2540 500 MobiDBLite consensus disorder prediction 425 481 - -
Acco10g2540 500 PANTHER IQ-DOMAIN 5-RELATED 34 439 - -
Acco10g2540 500 Pfam IQ calmodulin-binding motif 146 166 IPR000048 GO:0005515
Acco10g2540 500 Pfam IQ calmodulin-binding motif 172 187 IPR000048 GO:0005515
Acco10g2540 500 SMART iq_5 144 166 IPR000048 GO:0005515
Acco10g2540 500 SMART iq_5 167 188 IPR000048 GO:0005515
Acco10g2540 500 Gene3D - 143 192 - -
Acco10g2540 500 ProSiteProfiles IQ motif profile. 145 173 IPR000048 GO:0005515
Acco10g2540 500 Pfam Protein of unknown function (DUF4005) 386 424 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2540 Acco-ChrAcco10 36545525 36548236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2540 34 466 IQD Protein Family AT3G49260 50.540 3.77e-104 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2540 10 36545525 36548236 Acco10g2540 10 36545525 36548236 ECH