Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco10g2536 | ATGATTTTGATTCCTGGGTATTTCATATATCCATCACTTGTGGGAGGTTTCGGTGACTGGATGGACTTGGATAACATTGAGTGTGTGTCATCCTCGGATGGTATTGATGAAGACGAGATCCGCCATCATGGTATACATCCCCACCCCCATCATCACTCTGAGTTTTCATCCTCGAAGCCTCGCAATGGCGCCATCAATATGGGCCCCACGGCCATTGCTCCGGCAACCAGCGTCCACGAGTTGCTGGAATGCCCTGTCTGTACCAATTCCATGTACCCACCAATTCATCAGTGTCACAACGGGCACACCCTATGCTCAACATGTAAAACAAGGGTGCACAATCGATGCCCCACATGCAGACAAGAGCTTGGGGATATTAGATGTCTGGCTCTGGAGAAGGTAGCTGAATCACTTGAGTTACCATGCAAATTCTATTCCCTTGGATGTCCAGAAATCTTTCCATACTACAGCAAGCTCAAGCATGAGGCAGTGTGCAGTTTTAGACCATACAATTGTCCTTATGCTGGATCAGAGTGTTCAGTTGTTGGAGACATCCCTTTCCTCATTGCACATCTGAGGGATGATCATAAGGTGGACATGCACACAGGATGTACATTCAACCATCGTTATGTGAAGTCAAATCCCCGTGAAGTAGAGAATGCAACTTGGATGCTCACTGTATTTCATTGTTTTGGGCAATACTTCTGCCTTCATTTTGAAGCCTTCCAGCTAGGGATGGCACCTGTTTACATGGCTTTCCTTCGTTTCATGGGGGATGAGAATGATGCTCGAAACTATAGCTATAGCCTAGAAGTTGGGGCGAATGGCCGGAAACTGATTTGGGAGGGTACTCCAAGAAGTGTCCGGGATAGCCATCGTAAGGTCAGGGATAGTCACGACGGCCTTATCATCCAACGAAATATGGCCCTTTTTTTCTCTGGAGGAGACAGGAAGGAGCTTAAGCTTAGAGTTACCGGAAGAATATGGAAAGAACAACAGAATCCGGATGCTGGTGTGTGCATACCAAATCTCTGTAGCTGA | 1041 | 0.4697 | MILIPGYFIYPSLVGGFGDWMDLDNIECVSSSDGIDEDEIRHHGIHPHPHHHSEFSSSKPRNGAINMGPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYSLGCPEIFPYYSKLKHEAVCSFRPYNCPYAGSECSVVGDIPFLIAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDAGVCIPNLCS | 346 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco10g2536 | 346 | ProSiteProfiles | Zinc finger SIAH-type profile. | 137 | 197 | IPR013010 | GO:0008270 | |
Acco10g2536 | 346 | Pfam | Seven in absentia protein family | 126 | 325 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Acco10g2536 | 346 | SUPERFAMILY | TRAF domain-like | 137 | 329 | - | - | |
Acco10g2536 | 346 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 191 | 325 | IPR008974 | GO:0005515 | |
Acco10g2536 | 346 | FunFam | E3 ubiquitin-protein ligase SINAT5-like | 193 | 325 | - | - | |
Acco10g2536 | 346 | CDD | RING-HC_SIAHs | 82 | 120 | - | - | |
Acco10g2536 | 346 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 137 | 190 | IPR013083 | - | |
Acco10g2536 | 346 | FunFam | E3 ubiquitin-protein ligase SINAT3 | 31 | 135 | - | - | |
Acco10g2536 | 346 | SUPERFAMILY | RING/U-box | 78 | 124 | - | - | |
Acco10g2536 | 346 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 56 | 136 | IPR013083 | - | |
Acco10g2536 | 346 | CDD | Sina | 198 | 326 | - | - | |
Acco10g2536 | 346 | ProSiteProfiles | Zinc finger RING-type profile. | 84 | 120 | IPR001841 | - | |
Acco10g2536 | 346 | FunFam | E3 ubiquitin-protein ligase SINAT3 | 136 | 192 | - | - | |
Acco10g2536 | 346 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 63 | 331 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco10g2536 | Acco-ChrAcco10 | 36522053 | 36529662 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco10g2536 | 56 | 332 | C3H Transcription Factor Family | AT2G41980 | 75.899 | 4.28e-161 | 451 |