Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2532 ATGGAGTTTGGCAGAATCGGACCCTCCGATCCGGGTGGTTCCTCCAGGCGTTCCGACGCTCCCATCATTGATAAGCCCACCTCTTCATTACCCAATTCCTCTCCCTCCAAAAAGAAGAAGCTCATCTTCCTCGCAGTTGTCTCCACCGTGCTAATTGTCGGTTCCGCCATCTCTGCTGGCATTGTCATCGGTGGCCGGGCCCGTTTGTCGGGCCAAAATGGGGTGGCCGTACGGGGAAAGCCCACCGAAGCAATTTCTCGGACCTGTAGCAAAACCCAGTACCCCAACCTTTGTGTGAACTCTTTGCTTGAGTTCCCGGGCTCCACGACGGCCACGGAGCAAGAACTAGTCCACATTTCCTTTAACATGACCCTGCAGCACCTGAGCAAAGCTCTTTACTCATCCAACGGCATCTCCTACGTCCAGATGGATCCACTTGAACGGTCGGCGTACGAGGACTGCCTGGAGCTCCTGGAGGATTCCGTGGATGCTCTCGCACGATCCCTCACCTCCGTCGCCCCCTCCCCAGAGGACGGCAGCATCAGAGCGGTCGAGTCCCCCGACGATTTGATGACGTGGCTGAGCGCCGCTCTCACGAGTCAAGACACGTGTGTGGAGGGGTTGGCGGAGGCGAGGGGTTCCGTGAGGGATCAGATGGCCAATAATTTGAAGGACCTGTCGGAGCTGGTGAGCAATAGCCTGGCGATTTTCTCGAGCAGTGGGAGTGACGGCGGCGATTTCTCCGGAGTGCCGATACAGAACAGGAGAAGATTGATGGGAGAGAATAATGCAGATGAGTGGGGCAAGAGTAATCCTGGTAATTTCCCGAAATGGTTGAGCAGACGCGACAGGAGGCTGTTGAGCCTTCCGGTATCGGAGGTTCAAGCAGATATAGTAGTGTCGAAGGAGGGGAATGGTACGGTGAAGACAATCGCGGAGGCCATCAAGAAGGCGCCGGAGCACAGCAGTCGGCGCTTCATTATTTACTTGAGGGCAGGAAGGTATGAAGAGAAGGATTTGAAGTTGGGAAGGAAGAAGACGAATGTGATGTTGATCGGGGACGGGATGGGCAAGAGCATCATCAGAGGCAAGAAAAATGTTATGGATGGCCTCACCACATTCCACACTGCCTCCTTCGCTGCAACTGGTGCCGGTTTCATTGCGCGTGACATAACATTCGAGAACTACGCCGGTCCCAGCAAGCACCAGGCGGTGGCCCTCCGTGTCGGAGCTGACCACGCCGTCATTCACCGCTGCGAGATTCTCGGATACCAGGACACGTGTTACGTCCACTCCAACCGTCAATTCTTCCGCGAATGCCGCATTTCCGGAACAGTTGACTTTATTTTTGGAAACGCGGCGGTGGTTTTCCAAAACTGCAGCCTCTATGCTCGCAAGCCTATGGACCAGCAAAAGAACACCATCACCGCCCAAAACCGAAAAGACCCGAATCAGAACACCGGTATATCAATCCACAATTGTCGGATCCTTCCTGACCCGGACCTTGAGCAGGAAAAGGGGAGCATCTCTACCTATCTTGGCCGTCCGTGGAAATTATACTCTCGAACTGTGTATATGCTATCATTCATGGACGATCACATACATCCACGCGGGTGGCTGGAATGGGACGCCTCATTTGCTTTAGACACGTTGTACTATGGTGAGTACATGAATTATGGGCCGGGTGCGGGCGTTGGAGAACGGGTCAGATGGCCTGGTTACCGGGTAATTACATCACAGGTGGAGGCAGGACGGTTCACGGTGGCGGAATTCATATCTGGTTCGTCGTGGCTGCCGTCAACGGGAGTGGCATTTCTGGCTGGCCTATCTACCTAA 1836 0.5452 MEFGRIGPSDPGGSSRRSDAPIIDKPTSSLPNSSPSKKKKLIFLAVVSTVLIVGSAISAGIVIGGRARLSGQNGVAVRGKPTEAISRTCSKTQYPNLCVNSLLEFPGSTTATEQELVHISFNMTLQHLSKALYSSNGISYVQMDPLERSAYEDCLELLEDSVDALARSLTSVAPSPEDGSIRAVESPDDLMTWLSAALTSQDTCVEGLAEARGSVRDQMANNLKDLSELVSNSLAIFSSSGSDGGDFSGVPIQNRRRLMGENNADEWGKSNPGNFPKWLSRRDRRLLSLPVSEVQADIVVSKEGNGTVKTIAEAIKKAPEHSSRRFIIYLRAGRYEEKDLKLGRKKTNVMLIGDGMGKSIIRGKKNVMDGLTTFHTASFAATGAGFIARDITFENYAGPSKHQAVALRVGADHAVIHRCEILGYQDTCYVHSNRQFFRECRISGTVDFIFGNAAVVFQNCSLYARKPMDQQKNTITAQNRKDPNQNTGISIHNCRILPDPDLEQEKGSISTYLGRPWKLYSRTVYMLSFMDDHIHPRGWLEWDASFALDTLYYGEYMNYGPGAGVGERVRWPGYRVITSQVEAGRFTVAEFISGSSWLPSTGVAFLAGLST 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2532 611 SMART PMEI_2 80 236 IPR006501 GO:0004857
Acco10g2532 611 FunFam Pectinesterase 291 609 - -
Acco10g2532 611 ProSitePatterns Pectinesterase signature 2. 442 451 IPR033131 -
Acco10g2532 611 MobiDBLite consensus disorder prediction 21 35 - -
Acco10g2532 611 CDD PMEI-like_3 89 238 - -
Acco10g2532 611 NCBIfam pectinesterase inhibitor domain 80 237 IPR006501 GO:0004857
Acco10g2532 611 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 83 238 IPR035513 -
Acco10g2532 611 Gene3D - 291 609 IPR012334 -
Acco10g2532 611 PANTHER PECTINESTERASE 52 599 - -
Acco10g2532 611 Gene3D Invertase/pectin methylesterase inhibitor family protein 82 239 IPR035513 -
Acco10g2532 611 FunFam Pectinesterase 81 240 - -
Acco10g2532 611 Pfam Plant invertase/pectin methylesterase inhibitor 84 236 IPR006501 GO:0004857
Acco10g2532 611 Pfam Pectinesterase 297 594 IPR000070 GO:0030599|GO:0042545
Acco10g2532 611 SUPERFAMILY Pectin lyase-like 294 608 IPR011050 -
Acco10g2532 611 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2532 Acco-ChrAcco10 36503530 36506468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2532 1 610 Carbohydrate Esterase AT5G53370 62.806 0.0 790