Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2510 ATGGAAGATTCCGGCGCACATAACCTCATCAACGAGCTGCTTCAGGGAAGGGACCTCGCAAGACGCCTTCAAATATGTCTGAATGACCCCTCCACCTCCTCACAAACCCCCGACATGCTGATCCGTGCCATCATCGCCGCATTTGAGAAGGCCCTCGCTCTGCTCAACCCCACCGCCCTGCCGCCAGAATCGCCGCCTTTCACTCCTACCAGCCCTGAGTCCCATAACAAGCATTTCCAGCTCCAACACCAAAACACGTCGGCAAGATGGACCAAACAGGTTAGAATTAGCCCCGGCATGGCCGTTGAGTCCCTTCTCGACGACGGTTTTAGCTGGAGGAAGTATGGCCAGAAAGACATTCTGGGAGCCAAATTCCCAAGAGGATACTATAGATGTACCCATAGACATGCTCAAGGATGCTTGGCCACAAAGCAAGTGCAACGATCCGACCAAGACCCAGCGGTCATGGAAGTCAATTACAGGGGAACCCACACCTGCAAGCTCGCCTCCAGCCCTGCTCCTCCCTCACAAGAACAGCTCGTGAATCTCAGTGCAGGCCTAAGGGTGCTGACGGATAATTTAAATGCCTCTGATCAAACCTCTTTTTCTTCATTCCAATTGCCTTCCACTTCCAACGTCACACCCGACAACCGCGACTCCTTGTTGTGTCCTGCCATCCAAAACAATAATGTTGTTGAGAAATTTAGTTCTCCTCCTTACATGTCCCCTGCCACCTCTGCAAAAGCCCACTTTTCGGTGTCGCCTAGAGGGTTCGATAGCTTTGGAGGGCTCCTAAATTTGCCTGCTTCCACCTCTGACATGAACGACTCCTTCTCTCCGGCAATTGCTCCCACCGTCGATTCCGAGTTTTTATTTGACCAATTCGAACTTGAAGGCCCCAGCTTCGCATTTCATGATCCACAATTCTTTTAA 933 0.5155 MEDSGAHNLINELLQGRDLARRLQICLNDPSTSSQTPDMLIRAIIAAFEKALALLNPTALPPESPPFTPTSPESHNKHFQLQHQNTSARWTKQVRISPGMAVESLLDDGFSWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQRSDQDPAVMEVNYRGTHTCKLASSPAPPSQEQLVNLSAGLRVLTDNLNASDQTSFSSFQLPSTSNVTPDNRDSLLCPAIQNNNVVEKFSSPPYMSPATSAKAHFSVSPRGFDSFGGLLNLPASTSDMNDSFSPAIAPTVDSEFLFDQFELEGPSFAFHDPQFF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2510 310 Pfam WRKY DNA -binding domain 107 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g2510 310 SMART WRKY_cls 106 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g2510 310 SUPERFAMILY WRKY DNA-binding domain 104 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco10g2510 310 ProSiteProfiles WRKY domain profile. 101 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g2510 310 FunFam WRKY transcription factor 53 92 169 - -
Acco10g2510 310 Gene3D WRKY domain 91 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco10g2510 310 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 247 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2510 Acco-ChrAcco10 36348751 36349861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2510 8 171 WRKY Transcription Factor Family AT5G24110 45.238 9.40e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco10g2510 WRKY 4.1e-26 CL0274