Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2485 ATGTCTGGCACAGCTGGTCAGGTTATCAAGTGCAAAGCTGCGGTGGCTTGGGAGGCAGGGAAGCCACTGTCAATCGAAGAGGTAGAGGTAGCGCCTCCGCAGGCCGGAGAAGTGCGTCTCAAGATTCTCTTCACAGCCCTCTGCCATACTGATGTTTACTTCTGGGAAGCCAAGGGACAAACTCCAGTGTTCCCTCGTATATTAGGTCACGAAGCCGGAGGGATCGTGGAGAGCGTAGGGGAGGGAGTGACTCATCTGAAACCTGGAGACCAAGCTCTTCCGGTATTCACAGGCGAGTGTGGAGAGTGTCCACACTGTAAGTCGGAAGAAAGCAACATGTGTGACCTTCTCAGGATCAACACAGACAGGGGTGTTATGATCAGTGACGGCAAGTCAAGATTCTCTAAGGATGGAAAGCCAATATACCATTTTGTGGGAACTTCCACATTCAGCGAGTACACTGTTCTGCATGCTGGTTGTGTTGCTAAGATTAACCCTGCTGCTCCTCTGGACAAAGTTTGTATTCTCAGCTGTGGAGTCTGCACAGGATTTGGTGCTACCGTGAATGTTGCAAAACCAAAACCTGGTTCCTCTGTTGCCATTTTCGGATTGGGAGCTGTTGGCCTCTCTGCTGCTGAAGGGGCAAGGGTTTCTGGGGCATCCAGAATTATTGGGGTTGATTTAGTTTCCAGCCGTTTTGAGCTAGCCAAGAAATTTGGAGTGAATGAGTTTGTGAACCCAAAAGATCATGACAAACCTGTACAAGAGGTAATAGCTGAAATGACAAATGGAGGTGTGGATCGTGCGGTGGAGTGCACTGGGAGCATCCAGGCTATGATCTCAGCATTCGAATGTGTCCACGATGGATGGGGTGTGGCGGTACTTGTGGGAGTGCCAAACAAGGATGATGCATTCAAAACTCATCCAGTCAATTTCCTGAACGAGAAGACTCTGAAGGGAACCTTCTACGGCAATTACAAGCCCCGTTCTGATTTGCCTTCTGTGGTGGAGATGTACATGAGAGGGGAGCTGGAACTGGAGAAGTTCATAACTCACTCGGTGCCATTATCAGAGATCAACAAGGCATTTGACTACATGCTCAAAGGGGAGTCCATCAGTTTCATATCGGAAGTTTCATCTGTTTACTTGAAATTTCGGCGTCTGTGCCTTCCAACTCACATTCTTTCGGTGGCTGCTGTTTTCCACCCATCTGCAAGATATTCAACAACTCTCACTGTCATCGTCGTCCTTCATACTCATTATCCAGTAGCTATGTCTACCACAGCTGGTCAGATCATCAAGTGCAAAGCTGCGGTGGCTTGGGAAGCAGGGAAGCCACTGGTGATTGAAGAGATAGAGGTGGCGCCTCCGCAGTCTGGAGAAGTGCGTCTGAAAATCCTCTTTACCTCTCTTTGCCATACTGATGTCTACTTCTGGGAAGCCAAGGGTCAAACTCCTGTGTTTCCTCGTATATTAGGTCACGAAGCCGGAGGGATTGTGGAGAGCGTAGGGGAGGGAGTGACTCATCTGAAACCAGGAGATCATGCTCTTCCAGTGTTCACAGGCGAGTGTGGAGAGTGTCCACACTGTAAGTCGGAAGAAAGCAATATGTGTGACCTCCTCAGGATCAACACAGACAGGGGTGTTATGATCGGTGACGGCAAGTCCAGATTCTCTAAGAACGGACAGCCAATATTCCATTTTTTGGGAACTTCCACATTCAGTGAGTACACTGTTGTGCATGCTGGTTGTGTTGCTAAGATTGACCCTGCTGCTCCTCTTGACAAAGTTTGTGTTCTCAGTTGTGGGATCTGCACAGGATTTGGTGCTACTGTAAATGTTGCAAAACCAAAACCCGGCTCCTCTGTTGCTGTCTTCGGGCTTGGTGCTGTTGGACTTGCTGCTGCTGAAGGGGCAAGGGTTTCTGGTGCATCCAGAATTATCGGGGTTGATTTAGTTTCCAGCCGTTTTGAGCTAGCCAAGAAGTTTGGGGTTAATGAGTTTGTGAACCCAAAAGATCATGACAAGCCCGTGCAAGAGGTAATAGCTGAAATGACAAATGGAGGAGTGGATCGCGCGGTTGAATGCACAGGGAGCATCCAGGCCATGATCTCGGCATTTGAATGTGTCCACGATGGTTGGGGTGTGGCTGTACTAGTTGGAGTGCCAAACAAGGATGATGCATTTAAAACACATCCTGTGAATTTCTTGAACGAGAGGACCTTAAAGGGAACCTTCTATGGCAACTACAAACCCCGCTCTGATCTGCCTTCTGTGGTGGACAAGTACATGAAAGGGGAGATGGAAGTGGAAAAATTCATCACTCATTCAATCCCTTTCTCAGAGATCAACAAAGCCTTTGATCTCATGCTCAAAGGGGAGTCCATCAGATGCATCATTCGCATGGAAGATTAG 2415 0.4849 MSGTAGQVIKCKAAVAWEAGKPLSIEEVEVAPPQAGEVRLKILFTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTHLKPGDQALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMISDGKSRFSKDGKPIYHFVGTSTFSEYTVLHAGCVAKINPAAPLDKVCILSCGVCTGFGATVNVAKPKPGSSVAIFGLGAVGLSAAEGARVSGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNEKTLKGTFYGNYKPRSDLPSVVEMYMRGELELEKFITHSVPLSEINKAFDYMLKGESISFISEVSSVYLKFRRLCLPTHILSVAAVFHPSARYSTTLTVIVVLHTHYPVAMSTTAGQIIKCKAAVAWEAGKPLVIEEIEVAPPQSGEVRLKILFTSLCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMIGDGKSRFSKNGQPIFHFLGTSTFSEYTVVHAGCVAKIDPAAPLDKVCVLSCGICTGFGATVNVAKPKPGSSVAVFGLGAVGLAAAEGARVSGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRSDLPSVVDKYMKGEMEVEKFITHSIPFSEINKAFDLMLKGESIRCIIRMED 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2485 804 FunFam alcohol dehydrogenase 1-like isoform X1 443 606 - -
Acco10g2485 804 CDD alcohol_DH_plants 433 801 - -
Acco10g2485 804 FunFam Alcohol dehydrogenase class-P 607 745 - -
Acco10g2485 804 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Acco10g2485 804 Gene3D - 20 370 - -
Acco10g2485 804 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 493 507 IPR002328 GO:0008270|GO:0016491
Acco10g2485 804 Gene3D - 444 794 - -
Acco10g2485 804 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Acco10g2485 804 Pfam Alcohol dehydrogenase GroES-like domain 460 587 IPR013154 -
Acco10g2485 804 SUPERFAMILY GroES-like 328 374 IPR011032 -
Acco10g2485 804 PANTHER ALCOHOL DEHYDROGENASE 430 800 - -
Acco10g2485 804 FunFam Alcohol dehydrogenase class-P 183 321 - -
Acco10g2485 804 Gene3D - 183 321 - -
Acco10g2485 804 Gene3D - 607 745 - -
Acco10g2485 804 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Acco10g2485 804 CDD alcohol_DH_plants 9 372 - -
Acco10g2485 804 Pfam Zinc-binding dehydrogenase 630 758 IPR013149 -
Acco10g2485 804 Pfam Zinc-binding dehydrogenase 206 335 IPR013149 -
Acco10g2485 804 SUPERFAMILY GroES-like 4 186 IPR011032 -
Acco10g2485 804 SUPERFAMILY GroES-like 428 610 IPR011032 -
Acco10g2485 804 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 593 767 IPR036291 -
Acco10g2485 804 SUPERFAMILY GroES-like 752 801 IPR011032 -
Acco10g2485 804 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 343 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2485 Acco-ChrAcco10 36186407 36194341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2485 439 794 Monolignol Biosynthesis Gene Families AT1G72680 25.414 2.70e-14 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2485 10 36186407 36194341 Acco10g2485 10 36186407 36194341 ECH