Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2478 ATGGAAACGGGCGGTAGAGATGAGAAGATGAATGGCCATGATGAATTGAGGATCCAGCATCATGATAATAGGCAGGCACGCATGTGCATCCGAGGAGCTCATACAAGAACAGGATTTGACTTCATTCCAGAGACAGACCGAGGGGTGTTTACTGAGATTGATGCGTTATTGATTCTTTTCTTCGGTTATAGTCGGAGGCTTTCTCTGTTCAATTTCAACTCCTGGGCTCGATCGAGGACTGTTTGCAAGACTTATTATAAAGAAGCTAATCTCAATTACCTAGCTCGGTTTGCTTCTCTGTTTTGGGTTTCACAGCCTGGCTGTTTGCAGATGGGCTCTTTTCTTCGATTAAAAGAAGATTTCGTATTTTTTCCGAAGGCTTTGAGATTCATGCGAAAGCCGTTTGAAGTTTGCTTATCTGACCGCATCAGTGCAACCGTGACCTTCAGAATCGAAGGCCCTGGAAGAATTCTTGCTCATTTCTGCTGGCGTGCAGTAAATCCTCTGGAGCTTGGAGCCTTACGTTTTGACCTCAACATTGAAAAGATGGTACCCCCGGGACCACCCACTCCGATTGGTGGTGCCCAGTCTGTCTCACCCTCCCTCTTGAGATCTAATTCTGGCATGTTGGGAGCTCAAGGGGGTCCGATGCCTTCACAGTCTTCTTTTCCCTCGCTTGTGTCACCGCGGACTCAGTTTAACAACATGAACATGCTAGGAAATATGTCCAATGTATCGTCGATGCTGAATCAGTCTTTTCCAAATGGGGTTCCAAATTCTGCACTCTCTGGTCCCGGAAGTAGCCAGCGAGCAGGTGTTGATGCCGGAGCTAAAACAGATCCTCTTTCCAGTGTTGGCAATGGAATGAGCTTCAATAATACCACATCCTCGTATGTACAATCAAATATGGCGAATCCTGGTCCATCTGGTCAAGGTCAGGCCCAACAATTCTCAAATCCTTCTGGCAACCAACTATTGCCAGATCAACAACATTCCCAACAACTTGACACTCAAAATTTCCAACATAGTCAGCAGTCATTGCAACAGTTCTCAGCTCCTCTGAACTCTCTGCAACAACAGCAGCAGCAACATTTTCAATCAATTCGAGAAGGGATAGCTGGCATGGGACCTGTTAAATTGGAGCCCCAAGTAAACAATGATCAACTTGGGCAGCAGCAGCAGCAGATGCAATCATTGAGGAATCTTGCACCAGTGAAACTGGAACCTCAACAAATGCAAACAATGAGATCTATGCCACCGGTGAAAATGGAGCCCCAGCATTCTGACCAGTCATTATTTTTACAACAACAGCAGCAGCAGCAACAGCAACAACAATACCTCCACATGTCACGGCAACCCTCTCAGGCTACTGCTGCTCAGCTTAATCTATTGCACCACCAGAGACTGTTGCAATTACAACAGCACCAACAACTCTTAAAGGCAATGCCTCATCAACGGCCACAACTACAACAGCAATTTCAACAGCAGAGTATGCCTATAAGGACTCCCAAGCCAGTTTATGAACCTGGAATGTGTGCTAGGCGACTGACGCAGTACATGTATCAGCAACAGCATAGACCAGAAGATAACAACATTGAGTTCTGGAGGAAATTTGTTGCTGAATATTTTGCTCCTAATGCGAAAAAGAAGTGGTGCGTTTCTATGTATGGAAGCGGCAGACATACAACTGGGGTTTTTCCTCAGGACGTATGGCACTGTGAAATATGTAACCGCAAGCCAGGCCGCGGGTTTGAAGCAACCGTTGAGGTGCTTCCCAGGCTCTTCAAAATAAAGTACGAAAGTGGCACTTTGGAAGAGCTACTTTATGTTGACATGCCTCGGGAGTATCATAATGCCTCTGGTCAGATTGTTCTGGATTATGCGAAAGCAATACAAGAAAGTGTTTTTGAGCAACTCCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTTTCTCCTGATCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGTCACGAGGAGCTTATCCCAAGAAGACTGTTAATACCCCAGGTTAGTCAGCTTGGAGCAGCTGCTCAAAAATACCAGGCTTTTACTCAGAATGCAGCACCTAATTTATCTGTTCCTGATTTACAAAATAATTGCAATATGTTTGTTGCATCAGCGCGTCAGCTAGCAAAAGCCCTAGAGGTGCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTAATAGATTACAGCCGAGAAAAAGGGATTGGACCTATGGAAAGCTTGGCCAAATATCCTCGGAGAACCAGCAATTCATCTGGAGTTAATAGTCAAGCTCAACTGCCTGAAGATCAGTTACAGCAGCAACAGCCACAACAAATGGTGGCCCAAAACTCAAATGGTGATCAAAACTTGGCGCAGCCTGCTACTGTGCAAATGGCTTCTAGCAATGGGGTGCCTAGTGTAAATAACTGTATCAACTCAGTATCTGCATCAACTACTCCAAGCACCATTGTTGGGCTTCTCCACCAGAACTCCATGAATTCTAGACAACAGAATTCGATGAACAATGCCAGCAGTCCGTATGGTGGCAGTTCTGTTCAGATACCATCCCCAGGTTCTTCCAGTACCGTGCTGCCGGCACAGCCAAACCCGTCGCCATTTCAAGCACCAACACCATCGTCATCTAGCAATCCACCACAAACTTCTCACTCATCTTTAGCAGCTGGCAATCACATGAATTCATCTAATTCACCTGCTAATGTTTCCTTGCAACAACAGCAGTCATCCCTTTCTGGTGAAGCTGACCCCAATGATGCTCAGAGTTCAGTTCAAAAAATCTTATCAGGGATATACACCCAAAATAATGGCACTGGTGGAATGGTTAGTGTTGGCTCTTTTGGAAATGATGCCAAGAATGTGAATGGGAATATGCCAGTGAGTACCAATACAGGTCTCAATAGTGGCAACTGCCTGCCTGGCAATGGGCCTGTTAATGGCAATTCAGGTGTTGGGGCTGGTGGTTACGTTGCAATGGGCAGCGGGCTTGGTCAATCTGCTATGGTCAATGGGATGAGAGCTGCAATGGGCAACAACTCTATTATGAATGGGAGGGGAGGAATGGCATCTATCGCTCGAGACCAAGCTATGAATCATCAACAAGATTTGTCAAACCAACTACTTAATGGGCTAGGAGCAGTAAATAGTTTTAATAATCTTCAATTTGATTGGAAACCTTCCCCATGA 3267 0.4527 METGGRDEKMNGHDELRIQHHDNRQARMCIRGAHTRTGFDFIPETDRGVFTEIDALLILFFGYSRRLSLFNFNSWARSRTVCKTYYKEANLNYLARFASLFWVSQPGCLQMGSFLRLKEDFVFFPKALRFMRKPFEVCLSDRISATVTFRIEGPGRILAHFCWRAVNPLELGALRFDLNIEKMVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPSQSSFPSLVSPRTQFNNMNMLGNMSNVSSMLNQSFPNGVPNSALSGPGSSQRAGVDAGAKTDPLSSVGNGMSFNNTTSSYVQSNMANPGPSGQGQAQQFSNPSGNQLLPDQQHSQQLDTQNFQHSQQSLQQFSAPLNSLQQQQQQHFQSIREGIAGMGPVKLEPQVNNDQLGQQQQQMQSLRNLAPVKLEPQQMQTMRSMPPVKMEPQHSDQSLFLQQQQQQQQQQQYLHMSRQPSQATAAQLNLLHHQRLLQLQQHQQLLKAMPHQRPQLQQQFQQQSMPIRTPKPVYEPGMCARRLTQYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRHTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAFTQNAAPNLSVPDLQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSREKGIGPMESLAKYPRRTSNSSGVNSQAQLPEDQLQQQQPQQMVAQNSNGDQNLAQPATVQMASSNGVPSVNNCINSVSASTTPSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVLPAQPNPSPFQAPTPSSSSNPPQTSHSSLAAGNHMNSSNSPANVSLQQQQSSLSGEADPNDAQSSVQKILSGIYTQNNGTGGMVSVGSFGNDAKNVNGNMPVSTNTGLNSGNCLPGNGPVNGNSGVGAGGYVAMGSGLGQSAMVNGMRAAMGNNSIMNGRGGMASIARDQAMNHQQDLSNQLLNGLGAVNSFNNLQFDWKPSP 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2478 1088 PANTHER LIM DOMAIN-BINDING PROTEIN 388 1077 IPR029005 -
Acco10g2478 1088 MobiDBLite consensus disorder prediction 250 346 - -
Acco10g2478 1088 MobiDBLite consensus disorder prediction 416 443 - -
Acco10g2478 1088 MobiDBLite consensus disorder prediction 902 949 - -
Acco10g2478 1088 MobiDBLite consensus disorder prediction 771 807 - -
Acco10g2478 1088 Pfam LIM-domain binding protein 515 769 IPR029005 -
Acco10g2478 1088 MobiDBLite consensus disorder prediction 428 443 - -
Acco10g2478 1088 MobiDBLite consensus disorder prediction 283 346 - -
Acco10g2478 1088 MobiDBLite consensus disorder prediction 772 807 - -
Acco10g2478 1088 MobiDBLite consensus disorder prediction 856 890 - -
Acco10g2478 1088 MobiDBLite consensus disorder prediction 856 949 - -
Acco10g2478 1088 MobiDBLite consensus disorder prediction 250 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2478 Acco-ChrAcco10 36122286 36129880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2478 183 1084 C2H2 Transcription Factor Family AT1G43850 60.510 0.0 771
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2478 10 36122286 36129880 Acco10g2478 10 36122286 36129880 ECH