Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2474 ATGGAGGGCAAGGCCGATGTTATTTTCAAGACACCCGAAGCTAATTCAACATTGAATCTTCAGGACATTCAAGGACTGGTAACTTGGGTTCTTGCTGAAGGATTTATGCCGTCATGGGTTTTCATTAAGAACAAACCTCTTATTCAGAAAGTGGTTATGCTCTATACTCCAGGCCTGGATGCAGCTTTGTACTTGTCACAGTCTAAAGTGCTCCCCTTTTTAAAAAAAATATGCGGCAATCCAAAGGCCGTCTTAGCTCTTAGCTGTGTTTCAGATGGAATGCAGACCATAGATGCACTCCTAACGTGCAAGCTGAAAAGAAAGAGGGATGAATGTAGTTCAGTTTTGGAGAAATCGGCCCTGATATCTGAGCAAGAAAAAAGCAGCGGTGTTATGGATAATATATTATTTACGGAGCTTACAAAAAACATTCCTTTCCCTGTTACATATTATACTCTTACAGAGAAGGAATTAGAAGACAATGGATATTTATTTAAACAGCCAGGTTTTCTTTCTACTTTACCTGCTCCTTTGGGATCTTCTTCCTGTGAAATGATGGCGCTTGACTGTGAGATGTGCATCACAAATGAGGGTTTTGAACTTACAAGAATTACTCTAGTGAATTTTAATGGACAGGTTATGCTCGATAAATTGGTTAAGCCATCAAACGCTATCATTGATTACAATACCAGGTATAGTGGTATAACACCTGAGATGTTAAATGGGGTCACCACAAATCTGAAAGAAATTCAGGATGAATTTCTAAAGCTGGTTTACCAAGAGACTATTCTGGTTGGGCATTCTTTGGAAAATGATTTGTTAGCTCTGAAGATCGCTCATGGTTTGGTAATTGATACAGCAGTATTATACAAATACCGACGAGGCGCATCTCATAAAACTGCTCTGAGGATTCTTGCCAAGAAATTTCTCTCTCGGGAAATACAACAATCAGGGAATGGACATGATAGCATTGAAGATGCTAGAGCTGCAATGGAATTGGCACTATTAAAGATCAGACAGGGACCTGACTTTGGTTCTCCCCCATCTTTCATGCGGAAAAAGCTCTCTTCTATTTTGAGCGAGTCTGGCAAAACTTCCTCTTTGGTTGATAATATATCTATAGTAAAACGATATGCTTCTGAGTCGTCTAATGCAATTCCAGTGTCTTCTGATGATGAAGCACTTGCAAGGATTGCCAAGGAGGTGAAAAAGGAGAAGGTAAATTTTGTCTGGTCACAGTTTTCGGAATTACAGTCATACTTGAGGAAGCAGGCTGAGGATTCAGAGATCTTGAATAAAAGACTTGCGGAGATGATGTCATTGCTTACTTGTAAGAAGAATTCTGCTAAAGGTAAAGACATCAAGCTGAGAGCAACTTCTGAATTGAAGGAAATTCTAAGTCGCATGGATTCTAGAATTGAAGCTCTGTATAAGTCGTTGCCATCTAATGCTATGTTGATCATTTGCACCGGTCATGGAGACACAGCAATTGTGCACAGACTTAGGAGAATGCTTTCAGAGCAGAGCGAAACCACCATATGTCGTGAGAAGATTGTGGAAATCCTAGAAGAGGTTCAGGCTCGAGCTGAGGTTGCCTTGTGTTTTTTAGGTGTGAAGCATTGA 1623 0.4017 MEGKADVIFKTPEANSTLNLQDIQGLVTWVLAEGFMPSWVFIKNKPLIQKVVMLYTPGLDAALYLSQSKVLPFLKKICGNPKAVLALSCVSDGMQTIDALLTCKLKRKRDECSSVLEKSALISEQEKSSGVMDNILFTELTKNIPFPVTYYTLTEKELEDNGYLFKQPGFLSTLPAPLGSSSCEMMALDCEMCITNEGFELTRITLVNFNGQVMLDKLVKPSNAIIDYNTRYSGITPEMLNGVTTNLKEIQDEFLKLVYQETILVGHSLENDLLALKIAHGLVIDTAVLYKYRRGASHKTALRILAKKFLSREIQQSGNGHDSIEDARAAMELALLKIRQGPDFGSPPSFMRKKLSSILSESGKTSSLVDNISIVKRYASESSNAIPVSSDDEALARIAKEVKKEKVNFVWSQFSELQSYLRKQAEDSEILNKRLAEMMSLLTCKKNSAKGKDIKLRATSELKEILSRMDSRIEALYKSLPSNAMLIICTGHGDTAIVHRLRRMLSEQSETTICREKIVEILEEVQARAEVALCFLGVKH 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2474 540 CDD REX1_like 187 335 IPR034922 -
Acco10g2474 540 SMART exoiiiendus 184 343 IPR013520 -
Acco10g2474 540 Gene3D - 181 343 IPR036397 GO:0003676
Acco10g2474 540 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 29 355 IPR047021 GO:0004527
Acco10g2474 540 FunFam RNA exonuclease NEF-sp 181 345 - -
Acco10g2474 540 SUPERFAMILY Ribonuclease H-like 186 338 IPR012337 -
Acco10g2474 540 Pfam Exonuclease 187 333 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2474 Acco-ChrAcco10 36109309 36115619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2474 180 333 C2H2 Transcription Factor Family AT3G27970 26.163 1.83e-06 48.5