Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2473 ATGCAATGTTTTTGGGTACAGACTGACACTCTATGCGGGCAACCTAATCCAAGACAAACCATGTCCCTAGTTAGATCTGCTGAGCTGGCTGCTACAACCTATAAAAATTCTAAACTCTATTCTCCAAGGGGAACTGATGCTAAGCCAGGGTCCTCCCAAAGTTTTGATCCTGATAAACAAAGAAGTATGTACATGACAGATTCTTGCTCCAGTGAGAGTTATGAAAAGTACTTCCATGATTCACCATCTGAAGAACTGATAGAACCATCTAGTTCTGGGGTTTCAAGCAATTCATTTCGCCCAGATGATGCTTCTCCTTACCAGCCTATGGCTAGTTCAGGAGCTTCTATGGTTACTAATAACCCATTTGATACTTCTTTCATGTCCTCAAGGCGTCATGATGCCTATTATCAATCCAATTTTGGATCAGATTTCTCAGAAAATGAAAGCCTGGATGCCCTTGACTTTAATGGTCAAATGAGATTAAAACTGCAAGAATTAGAGAGGGCCCTGCTTGATGATGAGGAAGACATATTTGAGACCGCTCAAAGCATGGAAATTGACCCTGAGTGGGTTGATCCCATTCAGAACTTGCAGCTCCATGACTCACCAAAGGAGTCTTCATCCTCAGACTCTAACCTTAGCAGCATCAGTAGCAACAAAGAATTATCACATATCTCTTCTCAGACCCCCAGGCAACTGCTTCTTGAATGTGCTGGTGTACTTTCAGAAGGAAATTTAAAGGAGGCATCAGATATGATAAATAATCTCCGAAAGATGGTCTCAATTCAGGGAGATCCTCCCCAAAGAATTGCAGCCTATATGGTTGAAGGACTTGCAGCTCGCTTGGCTGAGTCCGGCAAGTCTATTTACAAAGCTCTGAAATGCAAGGAGCCTCCTTCTTCAGATCGTCTGGCAGCAATGCAGATATTATTTGAAGTGTGTCCATGTTTTAAATTTGGATTCATTGCTGCAAATGGTGCAATCACAGAGGCAGTGAAAGATGAAACCAAGGTGCACATTGTAGATTTTGACATCAACCAAGGAAGCCAATACATAACACTACTACAAGCACTTGCTTCAAGGCCAGGCAAGCCACCCCACGTGAGATTGACTGGAGTTGATGATCCAGAATCTGTACAACGATCTGTTGGAGGCCTAAAGATCATAGGACAAAGACTTGAGCAGCTAGCAGAAGCACTGAAGCTGCCATTCGAGTTTCGAGCCGTGCCATCAAGGACTTCCCTTGTCACACCTTCAATGCTCAAATGTCGCCCTGGGGAAGCACTTGTGGTGAACTTTGCTTTTCAGCTGCACCACATGCCGGATGAGAGTGTTTCCACGGTAAACGAGAGAGATCAACTCCTTCGCATGGTTAAGAGCCTAAATCCAAAAGTAGTAACAGTTGTGGAACAAGATGTGAACACTAACACAACCCCTTTCTTCCCAAGATTCGTAGAGTCTTACAATTATTACTCTGCTATTTTTGAGTCGCTTGATGCAACTCTTCCCAGAGAGAGTCAGGACAGGATGAATGTTGAGAGGCAATGCTTAGCAAGGGACATTGTCAACATTGTTGCATGTGATGGTGAGGATCGGATTGAAAGGTATGAAGTTGCAGGGAAATGGAGGGCAAGGATGGCAATGGCTGGATTCACTTCATACCCAGTGAGCAGTCACGTGACTGACTCAATTCGGAAACTCATCAGGCAGTATTGTGACATGTACAAGATGAAGGAGGAAATGGGTGCACTTCATTTTGGGTGGCAAGACAAGAACTTGATTGTAGCTTCGGCGTGGAGGTGA 1806 0.4413 MQCFWVQTDTLCGQPNPRQTMSLVRSAELAATTYKNSKLYSPRGTDAKPGSSQSFDPDKQRSMYMTDSCSSESYEKYFHDSPSEELIEPSSSGVSSNSFRPDDASPYQPMASSGASMVTNNPFDTSFMSSRRHDAYYQSNFGSDFSENESLDALDFNGQMRLKLQELERALLDDEEDIFETAQSMEIDPEWVDPIQNLQLHDSPKESSSSDSNLSSISSNKELSHISSQTPRQLLLECAGVLSEGNLKEASDMINNLRKMVSIQGDPPQRIAAYMVEGLAARLAESGKSIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVKDETKVHIVDFDINQGSQYITLLQALASRPGKPPHVRLTGVDDPESVQRSVGGLKIIGQRLEQLAEALKLPFEFRAVPSRTSLVTPSMLKCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKVVTVVEQDVNTNTTPFFPRFVESYNYYSAIFESLDATLPRESQDRMNVERQCLARDIVNIVACDGEDRIERYEVAGKWRARMAMAGFTSYPVSSHVTDSIRKLIRQYCDMYKMKEEMGALHFGWQDKNLIVASAWR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2473 601 MobiDBLite consensus disorder prediction 200 225 - -
Acco10g2473 601 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 207 597 IPR005202 -
Acco10g2473 601 Pfam GRAS domain family 232 601 IPR005202 -
Acco10g2473 601 ProSiteProfiles GRAS family profile. 222 601 IPR005202 -
Acco10g2473 601 MobiDBLite consensus disorder prediction 80 118 - -
Acco10g2473 601 Coils Coil 157 177 - -
Acco10g2473 601 MobiDBLite consensus disorder prediction 39 66 - -
Acco10g2473 601 MobiDBLite consensus disorder prediction 85 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2473 Acco-ChrAcco10 36105274 36107079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2473 19 601 GRAS Transcription Factor Family AT1G21450 63.113 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco10g2473 GRAS 3.4e-139 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2791 05 43071912 43073651 Acco10g2473 10 36105274 36107079 CCT
Acco10g2473 10 36105274 36107079 Acco10g2473 10 36105274 36107079 ECH