Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2465 ATGGATGGCCCTCCTCCAGAGTCTTATGTCATCCTTGCATGTGATGCCACCAAAGATATCAGTGAGCATGAGATCAAGTCCATTCTTGATAACGTACGAAGTACCAGTGGCATTTTATATGCAGGTTACAAATTGCTAGTGCTCGGCGTCTTGCATAAAGTGCTACACCCCATGGGGTGCCAGACATTACCATGCCCTGAGTCTTTTGCTGGCACGAATTTTCGTGCACTGGATGAAGCAGTTGGCATGAAACTTGATTCATATACAAATATGCTTTTGCCGATGTATGAAGATTGGAAAAATGCCGGGATCAGCATCGAAGTCAAAGTCACTGCAGGTTTTCCAATCAAACAGGTTATAATGCAGGAGGTTGCATGCTATAATGCAGCTTGGATTGTATTTGATAGGCACCTTCGTCGGGACACAAAATACTTTCACAAGATACCAAGCAAGGTTGCATTGGTTAAAGAAGACTTGTTTTTGAATATCTGGAGATCTCAAATATCAATTGAAACCGTAGATGTCACGGAAAGCAAGCTTGCTTATTCTTTGTCTAAATTTGTTTCTCTATCGGATTGTCAAAATGTTGCAGACAATGGGCATTCTATTTCCTCTTCCAAAACCTTTGCCTCAACAGTGGTTTCTTCTGACAACACAAAGCACCCATTTGCATCAGGCGAACAATTCTTCCCATCAGATCCTGGGTCGTCTTCTAGATCAGGTCCCCTTACTTCTCAGATTGTCCAAAGGCAAAACAAGTATGGTTTTATGAAAAAATCTTCAGATGCACCAATTCTTTGTGCTGGTTGTGGGATTAGGACTGAATTGGATGCTAAGGGGTCGATGAGGTTCAGCTATTCTGATATACAGAATGCAACAAATGATTTTTCAAAGGATAACTTATTGGGTGAAGGTGGTTATGGTCACGTGTACAAGGGTGTTCTTAGAGATGGACAGCAAATTGCTGCAAAGAATATGGTGATGCTGCTGGGTTACTGTTGCAAAGAAAGGCAAAATATTTTGGTATATGAATATATTTGCAACAAGTCACTTGACTGGCATTTATTCGGTTTAGAATTTGAGGATCAAGAAAACAATTTTGCAGATAAAGATGCTGCAATTCTTGAGTGGCCTCAAAGATATGATATTGCAATTGGAACTGCAAAAGGATTGCGCTTTCTCCATGAAGAATGCCGTGGGGCCCCCATTATTCATCGAGATATGCGACCTAGCAATATACTTCTAACTCATGATTTTGTTCCCATGCTAGGTGACTTTGGCCTCGCCAAATGGAAGACTGGTAGCGATGAGACTATGCAAACAAGGATAGTGGGCACATCAGGATACCTTGCTCCTGAGTATGCTGAAGATGGCGTTGTTTCTGTGAGGACAGATGTGTACGCTTATGGCATTGTTCTGTTACAATTAATATCAGGACGCAAGGTGGGCATGTCCAGTAGTAATCCTGAACAACCATCCCTCCGTCAATGGGCTGAACCATTGATTGAGAATTTGACTTTACAAGAACTCGTTGACCCACGTCTTGGGGGGTCATATGACACACTTGAACTTCACCATATGGCGAAAGCTGCGTACTTCTGTGTGCAAAGAAGGCCTGAGATGCGACCATCAATGGCTGAGGTGGTTTGCTTTCTTGAAGGACGGAATGATCATTTCCATGCCATGGCAGATCATTTCGTGCCTAATCACCATCAAGGGAGAGAAGGTTTGTATCCAAAGAGGGAGGATGAAAGTGAAGAAGGTGTTGACTTTTAA 1776 0.4245 MDGPPPESYVILACDATKDISEHEIKSILDNVRSTSGILYAGYKLLVLGVLHKVLHPMGCQTLPCPESFAGTNFRALDEAVGMKLDSYTNMLLPMYEDWKNAGISIEVKVTAGFPIKQVIMQEVACYNAAWIVFDRHLRRDTKYFHKIPSKVALVKEDLFLNIWRSQISIETVDVTESKLAYSLSKFVSLSDCQNVADNGHSISSSKTFASTVVSSDNTKHPFASGEQFFPSDPGSSSRSGPLTSQIVQRQNKYGFMKKSSDAPILCAGCGIRTELDAKGSMRFSYSDIQNATNDFSKDNLLGEGGYGHVYKGVLRDGQQIAAKNMVMLLGYCCKERQNILVYEYICNKSLDWHLFGLEFEDQENNFADKDAAILEWPQRYDIAIGTAKGLRFLHEECRGAPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGSDETMQTRIVGTSGYLAPEYAEDGVVSVRTDVYAYGIVLLQLISGRKVGMSSSNPEQPSLRQWAEPLIENLTLQELVDPRLGGSYDTLELHHMAKAAYFCVQRRPEMRPSMAEVVCFLEGRNDHFHAMADHFVPNHHQGREGLYPKREDESEEGVDF 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2465 591 Gene3D Transferase(Phosphotransferase) domain 1 348 568 - -
Acco10g2465 591 MobiDBLite consensus disorder prediction 225 244 - -
Acco10g2465 591 ProSitePatterns Tyrosine protein kinases specific active-site signature. 403 415 IPR008266 GO:0004672|GO:0006468
Acco10g2465 591 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Acco10g2465 591 SUPERFAMILY Protein kinase-like (PK-like) 281 561 IPR011009 -
Acco10g2465 591 Pfam Protein kinase domain 320 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2465 591 ProSiteProfiles Protein kinase domain profile. 296 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2465 591 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 359 562 - -
Acco10g2465 591 PANTHER OS01G0750732 PROTEIN 219 560 - -
Acco10g2465 591 MobiDBLite consensus disorder prediction 570 591 - -
Acco10g2465 591 Gene3D Phosphorylase Kinase; domain 1 271 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2465 Acco-ChrAcco10 36050034 36053471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2465 284 553 Trihelix Transcription Factor Family AT5G38560 40.066 3.70e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Acco10g2465 Pkinase 5.8e-25 CL0016