Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2454 ATGAAGAAGGTGATGGGGCTGATTATTCTGTTGGTAGGCATAGCGGCAAAAGCAGGTAAAGCTCAAATAGCCCTGCATGGTTGCCTAGACAAATGTGGCCATGTGGATATTCCATATCCATTTGGCGTTGGAGATCGCTGCTCTCTGAATCCACACTTCAATCTCGCCTGTAACCACACCACCACCACATTACATTACCCCCTCTCACGCACCCCGGTCTTGAACATATCCCTCGATGGCCATATGGACATCTCTATGTATGTCTCCCAGAATTGTTACGATGCCAAAGGAGAGAAGGTTCCTGGTCACTCTTTTCCTGCTTCTCTGATCAGTAATATTTCTGCTTTCCCCATTTCTAGCTCCGCAAACAAGTTCGTGAGTGTGGGTTGTGACAGTTTCGCCTACCTGAATAGTTTTCAGGACGGAGAGATGTATTCCACCGGCTGCTTATCGCGATGTAACCAACGTCCCCCACTAGGGAACAACACGGCTGGTGAAGCTTGTTCCGGAATTGGGTGTTGCCAAGTCGATATTCCTCCTCGAATGAAGAATATCACTTTTCAATCATATAGCTTCAACAATCATTCAGATGTGTGGGACTTCAACAACTGCAGCTATGCTTTTGTTGCCAAAACAGGCTCCTTTCACTTCTCCCCTGATTATCTTGAGAGTCTCCCCTTTGACAAGTCCCAGCTCGTGCTAGATTGGTCTGTTGTATCTAATGGTAGTTGTCATCAAGAAGCTAATTCTGTGTGCAACCCCAGGGCCTACTGTAACAACTCCGACAGTGGATTCGGATACAGATGCTTTTGCAAACCTGGGTTTGACGGAAATGCATACCATCCCGATGGATGTCAGGATGTTGATGAGTGCCTCGCACCCAATGCTTGTGATACCAAAGCGCATGCGCGGTGCAACAATTTCGATGGCGGCTACAACTGTTCTTGTCCACCTGGTTATGCAGGCGATGGCCGCGTTGATGGAACCCGCTGCACTCGGGACAGTCCGGATCTTTCGCGTTCTCTTGTCATAGCTCTAGGAGTTTGCGTGGCCTTGTTAGTTGGCTTCACACTGGTCTCCACATTATGCTGGGCTCACAAGCAACAAACTCTGAAACAAATTAGGGAAAGAAATTTTGACCAAAATGGAGGAAACATGCTGCTAGAAAGACTTTCACAGCAACAAGGATATGCCGATAGAACCAAAATATTTACACAAGTTGAGCTTCAGAATGCCACAAACAACTTTGATGATGAAAGAATCCTTGGTCGCGGGGGACAAGGCACAGTTTATAAGGGTATATTATCGAACAACAAGCTGGTTGCCATTAAGAAGTCTAGAGTAGGAGGGGATATTAGACAAATTAAGGATTTTATTAATGAAGTGGTTGTGCTTTCTCAAATCAACCATCGGAATGTAGTCAAACTTTTGGGTTGTTGTCTTGAAACTGAAGTTCCTTTGTTAGTCTATGAGTTTGTGGACAATGGCACCCTTCTTGACCACATTGACGCATCAAAGAATGAATGCGCTATTTCATGGGAGACTCGATTAAGAATAGCTGCAGAAACTGCCGAGGCCATTTCGTATTTACACTCTGCAGCTTCTATTCCAATATTTCATCGAGATATAAAATCTACCAACATATTATTGGACCACAATTGTAGAGCAAAAGTATCCGACTTTGGAGCTTCAAAGCTTGTTCCTATCAATGAAACTCAAGTTAGTACAGTGATACAAGGGACACTTGGATACTTGGATCCAGAGTACCTCCACACTGGTCAGTTAAATGAAAAGAGTGATGTTTATAGCTTTGGGGTTGTACTTATAGAACTACTTACTGGAGATAAAGCCGTTGAATTCAATGGATCAGAACAACGAAATTTGGCTATCTACTTTGTGTCTTCAATGAAAGAAGACCGTTTATGGGAAATTCTTGACGGGCAACTGTTAGATCAGAAGAAGAATGCCAAACAGTTGAGGGAAGTTGCTTTGCTTGCAAGAAGGTGCGTTAGAGTTAATGGAGAGGAAAGGCCAACTATGAAGGAAGTAGCAATGGAATTGGAGGGTTTGATTGCAATGGAAAGGCATCCTTGGGTGAAGAGTGGGGATGCTGTGCCGGAAGAAACTGAATACTTACTTGTTCATGTGCCTGACGATGGGGTTGCCGGTACTAGCAATTCATCCGGATACGATACCATGAGCAAGCAGATGGCATTTGAGATTGCAAATGGGCGTTGA 2238 0.4446 MKKVMGLIILLVGIAAKAGKAQIALHGCLDKCGHVDIPYPFGVGDRCSLNPHFNLACNHTTTTLHYPLSRTPVLNISLDGHMDISMYVSQNCYDAKGEKVPGHSFPASLISNISAFPISSSANKFVSVGCDSFAYLNSFQDGEMYSTGCLSRCNQRPPLGNNTAGEACSGIGCCQVDIPPRMKNITFQSYSFNNHSDVWDFNNCSYAFVAKTGSFHFSPDYLESLPFDKSQLVLDWSVVSNGSCHQEANSVCNPRAYCNNSDSGFGYRCFCKPGFDGNAYHPDGCQDVDECLAPNACDTKAHARCNNFDGGYNCSCPPGYAGDGRVDGTRCTRDSPDLSRSLVIALGVCVALLVGFTLVSTLCWAHKQQTLKQIRERNFDQNGGNMLLERLSQQQGYADRTKIFTQVELQNATNNFDDERILGRGGQGTVYKGILSNNKLVAIKKSRVGGDIRQIKDFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVDNGTLLDHIDASKNECAISWETRLRIAAETAEAISYLHSAASIPIFHRDIKSTNILLDHNCRAKVSDFGASKLVPINETQVSTVIQGTLGYLDPEYLHTGQLNEKSDVYSFGVVLIELLTGDKAVEFNGSEQRNLAIYFVSSMKEDRLWEILDGQLLDQKKNAKQLREVALLARRCVRVNGEERPTMKEVAMELEGLIAMERHPWVKSGDAVPEETEYLLVHVPDDGVAGTSNSSGYDTMSKQMAFEIANGR 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2454 745 Pfam Wall-associated receptor kinase galacturonan-binding 28 81 IPR025287 GO:0030247
Acco10g2454 745 CDD STKc_IRAK 422 690 - -
Acco10g2454 745 FunFam Wall-associated receptor kinase 2 493 710 - -
Acco10g2454 745 FunFam Fibrillin 2 282 327 - -
Acco10g2454 745 SMART egf_5 243 286 IPR000742 -
Acco10g2454 745 SMART egf_5 290 332 IPR000742 -
Acco10g2454 745 Gene3D Transferase(Phosphotransferase) domain 1 493 703 - -
Acco10g2454 745 ProSiteProfiles EGF-like domain profile. 287 332 IPR000742 -
Acco10g2454 745 ProSiteProfiles Protein kinase domain profile. 416 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2454 745 Pfam Protein kinase domain 417 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2454 745 Gene3D Laminin 290 333 - -
Acco10g2454 745 ProSitePatterns Calcium-binding EGF-like domain signature. 287 314 IPR018097 GO:0005509
Acco10g2454 745 Gene3D Phosphorylase Kinase; domain 1 388 492 - -
Acco10g2454 745 SUPERFAMILY EGF/Laminin 286 324 - -
Acco10g2454 745 Pfam Calcium-binding EGF domain 287 329 IPR001881 GO:0005509
Acco10g2454 745 SMART serkin_6 416 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2454 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Acco10g2454 745 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 690 IPR045274 GO:0007166
Acco10g2454 745 SMART egfca_6 287 332 IPR001881 GO:0005509
Acco10g2454 745 SUPERFAMILY Protein kinase-like (PK-like) 402 711 IPR011009 -
Acco10g2454 745 FunFam Wall-associated receptor kinase 2 386 492 - -
Acco10g2454 745 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 305 316 IPR000152 -
Acco10g2454 745 CDD EGF_CA 287 323 - -
Acco10g2454 745 ProSiteProfiles EGF-like domain profile. 240 286 IPR000742 -
Acco10g2454 745 Gene3D Laminin 242 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2454 Acco-ChrAcco10 35987822 35990781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2454 28 745 Receptor kinase-like Gene Family AT1G21230 44.158 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco10g2454 Pkinase 4.7e-48 CL0016