Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2453 ATGGCTGATCTAAAGAAGATGTTGTTCATTCTACTATTTGCTGCAGCCATGGTGGCAAGTGAAGCTCAATCCCTCGCAGGCTGTCTCAACAAATGCGGTGACGTGGACATTCCGTATCCATTTGGTGTGGGAGTTCAACCTGTAACTTCTCGCAACTGTTTCTTGGATGAAACATTCCAGCTCACCTGCGACAAGTCCACATTATTCCTCAAAAACCTCCCAGTTTCTAACATATTCCTCCAAGAGGGTCAAATCGACATTTCCATGCATGTGTCCAGGATCTGTTACGATCACTCAGGAGTAGTTCTAGACCAATCTTCTTCCAATTTTTACACCGGTGGTGCTTTCACCATTTCCAGCGGCAAAAACACGATCATAAGTCTTGGTTGCGACACTTTGGGCATCGTTAATTTCCTGGACCACGATCTGAGCTATTCAGGCGGCTGTGTATCGCTGTGCGATACGCCGCCTCCAAAGGACAATAACCCCAACGCATGTTCCGGGTCAGGGTGTTGCCAGGTCAATAATATTCCCATCGGAAAGAGTAACTACTCATTGGTAGTATCCGCCATCAACAACCATAAAAAAGTATTGGCCTTCAACAACTGTAGCTATTCTTTTCTCGCCAAACAGGGCTGGTTTAATTTCTCTCTTGATTATCTACAGTACTTTCCCTTCGATATGGCCCCCTTCTCCCTAGACTGGACTATTTCACGTCTGACCTGTCAATCTGCTTCTTCCAATACTACTACCAGAGACTATGCCTGCAAATCCAACTCGTATTGCGTGGATTCTAATGTTGGAGTTGGCTACAATTGCAAATGCAAACTTGGCTTTGAGGGAAATCCATATCATCCCGATGGGTGTCACGATGTTGATGAGTGTAGCAGACCCAACAACTGCAGTATTCCGAAGCAATGCTACAACTTCGTTGGTGGTTACACTTGTTCTTGTCCTCCCCATTATAAGGGCGACGGCTACACTAATGGGACTGGCTGTACAAAGGACCACCGTCGATCTATGTATAAATGGCTTGTCAGTATAATTGCTTTGGGTTGTAGTGTGGGCTTACTGGTTGTCATCGCGGTCGTCTTATCAGTGGGTTGGGCAGACAAGCAAAAATCGTTGAAAGATCTCAGAAAAAGAAATTTTGAGCAAAATGGAGGATACGTGCTGCTTGGACAACTTTCACAAAAAGAAGGATACACTGAAAGAACAAAAATATTCAAAGAAGTTCAGCTTCTAAATGCAACAAACAACTTTCATCAGACTAGAGTAATTGGTACTGGGGGACAATGCATAGTCTACAAGGGTATATTGCCTAACAATACTCCCGTTGCAATTAAAAAGGCTAAAGTAGGAGATGATCCTAGACAAATTAGGGATTTCATTAGTGAAGTAGCCGTACTTTCCCAAATCAACCACAAAAATGTTGTTAGACTTTTGGGATGTTGCCTCGAAACAGAAATTCCTTTATTAGTCTATGAATTTGTGGACAATGGCACGCTTCTTGACCACATAGATCCTACAAAAACTACATCTTCTATTTCATGGAAAACTCGATTAAGGATAGCTACAGAAACTGCCGAGGCAATTTCATATTTGCACTCTGTCACTTCAATTCCTATTGTCCATCGGGATATCAAGTCTGCTAATATACTTTTAGATTGTAATTACAAAGCACAGGTGTCTGACTTTGGAGCTTCAAGACTTGTTCCTCTGGACAAATCTGATGTTTCCACGGTGGTGCAAGGTACTTTTGGCTACTTGGATCCAGAATATCTCCACACAGGTCAGTTGAATGAAAAAAGTGATGTTTATAGTTTTGGAGTTGTACTCATGGAATTGCTCACGGCAAGCAAAGTAGTTGAATTCAATAGACAAGCAGGAGAAGTGAATCTGGCGACGCATTTTGAGTCTTCGATGAAAGCAAACCGTCTGTGGGAAATTCTTGACAAACGGGTGTTAGATGAAAAGAATGGAGAGGAGATGGAAGAAGTGGCTTTATTAGCAATGAGGTGTATTAGCGTAAAAAGAGAGGAAAGGCCAACGATGAAAGAAGTAGCAAAAGAGTTAGATTTGATTGCAAATAAAGCGCGATGA 2103 0.4242 MADLKKMLFILLFAAAMVASEAQSLAGCLNKCGDVDIPYPFGVGVQPVTSRNCFLDETFQLTCDKSTLFLKNLPVSNIFLQEGQIDISMHVSRICYDHSGVVLDQSSSNFYTGGAFTISSGKNTIISLGCDTLGIVNFLDHDLSYSGGCVSLCDTPPPKDNNPNACSGSGCCQVNNIPIGKSNYSLVVSAINNHKKVLAFNNCSYSFLAKQGWFNFSLDYLQYFPFDMAPFSLDWTISRLTCQSASSNTTTRDYACKSNSYCVDSNVGVGYNCKCKLGFEGNPYHPDGCHDVDECSRPNNCSIPKQCYNFVGGYTCSCPPHYKGDGYTNGTGCTKDHRRSMYKWLVSIIALGCSVGLLVVIAVVLSVGWADKQKSLKDLRKRNFEQNGGYVLLGQLSQKEGYTERTKIFKEVQLLNATNNFHQTRVIGTGGQCIVYKGILPNNTPVAIKKAKVGDDPRQIRDFISEVAVLSQINHKNVVRLLGCCLETEIPLLVYEFVDNGTLLDHIDPTKTTSSISWKTRLRIATETAEAISYLHSVTSIPIVHRDIKSANILLDCNYKAQVSDFGASRLVPLDKSDVSTVVQGTFGYLDPEYLHTGQLNEKSDVYSFGVVLMELLTASKVVEFNRQAGEVNLATHFESSMKANRLWEILDKRVLDEKNGEEMEEVALLAMRCISVKREERPTMKEVAKELDLIANKAR 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2453 700 Pfam Calcium-binding EGF domain 291 326 IPR001881 GO:0005509
Acco10g2453 700 Gene3D Phosphorylase Kinase; domain 1 394 497 - -
Acco10g2453 700 SMART egfca_6 291 334 IPR001881 GO:0005509
Acco10g2453 700 SUPERFAMILY Protein kinase-like (PK-like) 405 692 IPR011009 -
Acco10g2453 700 ProSiteProfiles EGF-like domain profile. 291 328 IPR000742 -
Acco10g2453 700 CDD EGF_CA 291 325 - -
Acco10g2453 700 Pfam Protein tyrosine and serine/threonine kinase 423 692 IPR001245 GO:0004672|GO:0006468
Acco10g2453 700 SMART serkin_6 421 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2453 700 FunFam Fibrillin 2 286 329 - -
Acco10g2453 700 FunFam Protein kinase superfamily protein 456 501 - -
Acco10g2453 700 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 695 IPR045274 GO:0007166
Acco10g2453 700 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Acco10g2453 700 Pfam Wall-associated receptor kinase galacturonan-binding 28 87 IPR025287 GO:0030247
Acco10g2453 700 CDD STKc_IRAK 427 695 - -
Acco10g2453 700 ProSitePatterns Calcium-binding EGF-like domain signature. 291 316 IPR018097 GO:0005509
Acco10g2453 700 Gene3D Laminin 241 333 - -
Acco10g2453 700 ProSiteProfiles Protein kinase domain profile. 421 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2453 700 FunFam Wall-associated receptor kinase 2 498 700 - -
Acco10g2453 700 Gene3D Transferase(Phosphotransferase) domain 1 498 700 - -
Acco10g2453 700 SMART egf_5 241 290 IPR000742 -
Acco10g2453 700 SMART egf_5 294 334 IPR000742 -
Acco10g2453 700 SUPERFAMILY EGF/Laminin 291 326 - -
Acco10g2453 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2453 Acco-ChrAcco10 35970169 35972507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2453 8 695 Receptor kinase-like Gene Family AT1G21250 43.121 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco10g2453 PK_Tyr_Ser-Thr 3.9e-46 CL0016