Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2451 ATGGAAGAGGAAGGAGTTGAAAGAAGAGGCAGAAAGGGGGATACAATTGATGATGCCGGTGGATTTGAGGAATTGGATCTCGTGAAGAGAATTTTTATTTCACTGCTTTCCATGAAAAAGGTTGCTGGGTCGCACATCTTGCTTGAATTTCACCGCATAGGGCGTGGAGGGATGTGGAAGGCCATTAAAATCTGGTGGTGGTGGTGGATGAGTGCATTAGCAGTTATGGCGGTTGCCGCCGCCCAATCCCTGCCTGGTTGCCCCAGTAAATGCGGGCAAGTTGAGATTCCATTTCCATTCGGGGTGGGTGTTCAACCTGGTACCGGCAGCAACTGTTTCTTCCAGGAGGCGTTTCAACTGGATTGTACAAACTCCACGTTATTTCACGTTAAATCCGAAATTTCAAGCATTTCCCTCAAAGGTCAAATGGATATGTGCATGCCTGTTTCCAGGATTTGTTTCAATGATACAGGCGGAGAAATAGGCAAGATTACAGTCAGTCTTTCTACCCCAGGTTTCACCTTCTCCAGCAGTGAAAACAAGTTCGTGAGCGTTGGCTGCGACACTTACGGCTACTTAAACAGTTTCCAAAACAGTCATACATATTCCACTGGCTGCTTGACGCGATGTAACGGAGTTCCCAGTTATCAGCAGGACGATGGAACTTGTTCTGGGATTGGGTGCTGCCGGGTGGATATTCCTCTGGGAATGAGGAACATTAGCATTGAAGCCTTCAGCTTTAATTTTCAGCAAAAGGCGCCTGATTTCAACAATTGTAGCTACGCTTTTGTGGCCAAGGAAGGGTGGTTTAATTTCTCCACGGCTTATCTCAGGTCCTTACCATTTGATAAGGCACTTCTGGTTGTAGATTGGGCTATTTCCGACGGCACATGTGAGAATGAGAAGACATCACCGGATTATGCCTGCCAATCTAACACCAACTGTGAGGACTCAGGCTATGGATTCGGGTACCGATGCAAATGCAAACCCGGTTTTGAAGGGAACCCGTATCTTCCCGAGGGTTGCCTAGATATCGACGAGTGTAAGGAATCGAGCCATGACTGCACAAGTGAAGATAACTGTCGTAACACGGTTGGGTCTTATGAATGTTTTTGCCCTCGCGGCTACACTGGGACTGGAACCAAGCAATCAGGATGCCACCCGCCATGGCGCCGCAATCCACTTACAATACTTCACATTGTTGCAAGCGTGGGATTGGTAGTTCTCTTTGTGAGTGTGGCCTGGCTGTATTTGATATACCAGAAGAGGAAGCTGATGAAGGAGAAGGAAAAATTCTTTCGACAAAATGGGGGCGCTATTTTGCAGCAAAAGCTCTCTGTAAAACAGGATTCCTCCCTCACAGCCAAAATCTTTACTGCTCAAGAATTGAAAAGGGCTACCAACAACTTTCACGACAGCTTAGTTATTGGCCGAGGCGGTTTCGGCACTGTTTACAAAGGAATTCTCCCAGACAACACGGCTGTCGCAATCAAGAAATCAAAACTGGTGGAACAAAGTCAAGTTGAACAATTCATTAATGAGGTGATGATACTCACCCAGATAAATCACAGGAATGTGGTCAAACTCCTAGGTTGTTGTCTAGAAACAGAGGTTCCTTTATTAGTCTATGAGTTCGTTAATAATGGCACCCTATTCGAATCCATACATAACAAAAGCAAAGCTAGTGTTTTTACTTGGGAAACCCGTCTGAGGATAGCAGCCGAAGTAGCAGGAGCTCTGTCTTATTTACACTCTGCTGCCTCCACACCCATCATCCACAGAGACGTCAAGTCGGCTAATATCCTTCTGGACAAGACTTTAACTGCCAAAGTCTCTGATTTTGGAGCCTCCAAATTAATTCCACTAGATCAAGTGGAGCTAGCCACAATGGTACAAGGCACTTTCAGATACTTGGATCCAGAATACATGCAAACGAACCAACTCACTGAGAAGAGCGATGTTTACAGTTTTGGCGTTGTAGTTCTGGAACTCCTAACAGGAAGAAAGGCGGTGTCATTTGATGGGCCAGAAGAGGAAAGAAGCCTTGCAATGCACTTCCTATCATCCTTTAACGAAAGTCGCTTGTTTGAAGTGGTTGAGAGAGGGATGGCTAATGATGAAAATCAGAAGACGCTGAAGGAAGTGGCTGAGCTTGCAGCGAGGTGCTTGAGGCTTAGAGGAGAGGAGAGACCAAGCATGAAGGAAGTGGCGATGGAGTTGGAGGGAATAAGGATGATAGGGAAACATCCATGGATCGACAAACACTTCAATAATGCCGAGGAATCACACGTATTACTTCCTCATCAGACGTCCCGTTTGACTGAATCTGTTGATAGCATGGTCTATAGAAACACTGCATGGGATAGCATTTCAGATGGTGTGCCGATTGATTTAGGTGATGGAAGATGA 2409 0.4595 MEEEGVERRGRKGDTIDDAGGFEELDLVKRIFISLLSMKKVAGSHILLEFHRIGRGGMWKAIKIWWWWWMSALAVMAVAAAQSLPGCPSKCGQVEIPFPFGVGVQPGTGSNCFFQEAFQLDCTNSTLFHVKSEISSISLKGQMDMCMPVSRICFNDTGGEIGKITVSLSTPGFTFSSSENKFVSVGCDTYGYLNSFQNSHTYSTGCLTRCNGVPSYQQDDGTCSGIGCCRVDIPLGMRNISIEAFSFNFQQKAPDFNNCSYAFVAKEGWFNFSTAYLRSLPFDKALLVVDWAISDGTCENEKTSPDYACQSNTNCEDSGYGFGYRCKCKPGFEGNPYLPEGCLDIDECKESSHDCTSEDNCRNTVGSYECFCPRGYTGTGTKQSGCHPPWRRNPLTILHIVASVGLVVLFVSVAWLYLIYQKRKLMKEKEKFFRQNGGAILQQKLSVKQDSSLTAKIFTAQELKRATNNFHDSLVIGRGGFGTVYKGILPDNTAVAIKKSKLVEQSQVEQFINEVMILTQINHRNVVKLLGCCLETEVPLLVYEFVNNGTLFESIHNKSKASVFTWETRLRIAAEVAGALSYLHSAASTPIIHRDVKSANILLDKTLTAKVSDFGASKLIPLDQVELATMVQGTFRYLDPEYMQTNQLTEKSDVYSFGVVVLELLTGRKAVSFDGPEEERSLAMHFLSSFNESRLFEVVERGMANDENQKTLKEVAELAARCLRLRGEERPSMKEVAMELEGIRMIGKHPWIDKHFNNAEESHVLLPHQTSRLTESVDSMVYRNTAWDSISDGVPIDLGDGR 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2451 802 ProSiteProfiles Protein kinase domain profile. 470 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2451 802 SUPERFAMILY Protein kinase-like (PK-like) 456 779 IPR011009 -
Acco10g2451 802 Pfam Wall-associated receptor kinase galacturonan-binding 87 141 IPR025287 GO:0030247
Acco10g2451 802 SMART egf_5 347 387 IPR000742 -
Acco10g2451 802 SMART egf_5 297 343 IPR000742 -
Acco10g2451 802 ProSitePatterns Calcium-binding EGF-like domain signature. 344 370 IPR018097 GO:0005509
Acco10g2451 802 CDD EGF_CA 344 379 - -
Acco10g2451 802 FunFam Wall-associated receptor kinase 2 440 545 - -
Acco10g2451 802 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 76 749 IPR045274 GO:0007166
Acco10g2451 802 FunFam Fibrillin 2 339 384 - -
Acco10g2451 802 FunFam Wall-associated receptor kinase 2 546 763 - -
Acco10g2451 802 ProSitePatterns Protein kinases ATP-binding region signature. 476 499 IPR017441 GO:0005524
Acco10g2451 802 SUPERFAMILY EGF/Laminin 344 379 - -
Acco10g2451 802 Gene3D Laminin 296 345 - -
Acco10g2451 802 Gene3D Transferase(Phosphotransferase) domain 1 546 758 - -
Acco10g2451 802 CDD STKc_IRAK 476 743 - -
Acco10g2451 802 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 361 372 IPR000152 -
Acco10g2451 802 SMART serkin_6 470 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2451 802 Pfam Protein kinase domain 471 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2451 802 SMART egfca_6 344 387 IPR001881 GO:0005509
Acco10g2451 802 Gene3D Phosphorylase Kinase; domain 1 435 545 - -
Acco10g2451 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672|GO:0006468
Acco10g2451 802 Gene3D Laminin 346 383 - -
Acco10g2451 802 ProSiteProfiles EGF-like domain profile. 344 387 IPR000742 -
Acco10g2451 802 Pfam Calcium-binding EGF domain 344 386 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2451 Acco-ChrAcco10 35955390 35960294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2451 73 802 Receptor kinase-like Gene Family AT1G21230 43.490 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco10g2451 Pkinase 1.8e-51 CL0016