Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2450 ATGGCATCGTCATCGAATTCACCATGTGCGGCTTGCAAGTTTCTTCGGCGAAAGTGCCAACCGGAGTGCGTGTTTGCACCCTACTTTCCGCCAGATCAGCCGCAAAAATTCGCGAATGTGCACAAAGTATTTGGAGCGAGCAATGTTACCAAGCTCCTCAACGAGTTACACCCCCACCAGCGTGAAGACGCCGTCAATTCTCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGGAGTCATCTCTCTCCTCCAACACCAACTCCGCCAGCTCCAAATGGACCTCACCTGCGCCAAGTCCGAGCTGTCCAGGTACCAGACCTTGGGCATCACCGGCCACAGCCTCATCGCCGCCCACCACCAGGCCCAAAACATGGGCATGAACCTGATCGGCGACCATTACCATCACCACCACCACCACCAGTTCTTCCCCCGGGACCACCATCAGTCCTCCATTATCAGGACATTTGATGCGGGTAACAACTATGATGGCGGTCTCCTGTCCATGAACGTCTCCGCAAGCATTGGGCAGCTCAGCCAGTTTCAGCATCAGCACCCTAGAGCTGCTGCCGGCGACGATCGTCGGACTATTGATCCCTCTTAG 621 0.5717 MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSRYQTLGITGHSLIAAHHQAQNMGMNLIGDHYHHHHHHQFFPRDHHQSSIIRTFDAGNNYDGGLLSMNVSASIGQLSQFQHQHPRAAAGDDRRTIDPS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2450 206 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Acco10g2450 206 Coils Coil 87 114 - -
Acco10g2450 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 144 - -
Acco10g2450 206 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2450 Acco-ChrAcco10 35954178 35954798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2450 2 206 AS2 family AT1G65620 71.495 5.75e-94 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco10g2450 LOB 2.8e-43 No_clan