Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2437 ATGAAAATACTGCAAATGGGAGAGGCCGGAGAAGTCCACGGTGGAAGCTCCGATGGCCGGACGGTGGTGGTGGGAATGAAGCTGGACTCGGCCAGCAAGGAGCTTCTCACTTGGGCTCTGGTCAAAGTCGCTCAGCCTGGTGATGTTGTGGTTGCTCTTAATGTTCTTGGCAACAATCAAATCGTCGATCGAGACGGGAAATTGTCCCTTCTTTCGCTTGTCAACGCATTCGACTCTGTTCTTGCTGTTTACGAAGGTTTCTGCAATTTAAAACAGGTGGATCTCAAGCTCAAAGTTTGCAGAGGTCCATCAGTGAGGAAAATTTTAATCCGAGAAGCAAATGCTTATTCTGCAACTCATCTTATAGTAGGAACAGCACATGGACTTCATACAATTCGGCCATCAACCTCTGTAGCTAAGTACTGTGCCAAAAAGTTATCCAGGAACTGCTGTGTTCTGGCTGTTAATAATGGGAAAGTTGTGTTCAAGAGAGATGGCTCCCCAGCAACACCTCACTCAAAAGGAATTGATCGTCAGAACAAAATTGGTTTGCTTGAAACTATTCACCGGACATTCAATAAGAGTTCTAAAGTACTAAATGACGACAATACAGAAAATAAGCATGGGAAAGATTTTCTGGGATCTAAAGAATCTGTGATTGAGAAACCAAGATGCTCAATATGTTGCTCAGTTTCAGCACTGCCAAACATGTCCTGCCACCATTCTGCAGAGAAGCCTTCAGGTGATGGTGGTACCAACGAAAATGCTTTGGCCATAGTGCCTGTACAGACAACTGAGACAGGATCAAGTACTGCAACAACCTTGTCTGACAGAGAACTACCTGAGCTGAAACCTGGTTGGCCACTGTTACAAAGGAAAGTTTTATCAGATAGAGAGTCCAATGATCCATCATCCATGTGTCAGATATCTGTGGTCCAGTGGGCAATGCAGTTGCCTTGTAGAAATCTTTCATATGACACAGCAGATCATGATCATAAACAAGCTATAGCTTTAGATGGCAGAAGTGGTGCTATTGTTCCAGTTGATGTTCTAATAAGGACTGATTCTTCTTCACCAGACGGCAATTCAAAAGGTATTCCTAAAGAATTGGAGGATCTTCACGAGAAATACTCATCCTCGTGCAGATTGTTTCAGTACCAGGAACTTGTACGGGCAACTTCAAATTTCTCGCGAGAAAATTTGATTGGAAAAGGAGGAAGTAGTCAGGTTTATAGGGGTTGCCTTCCTGATGGCAAGGAGCTTGCCGTTAAGATTTTAAAGCCTTCTGATGATGTTTTGAAGGAGTTTCTATTGGAAATAGAAATTATCACTACCTTGCACCATAAAAACATTATTTCCCTCCTGGGTTTCTGCTTTGAGGATGGCAATCTTCTTTTGGTATATGATTTTTTGCCTAGAGGAAGCCTCGAAGACAATCTTTATGGGAGTAAGAAAAATCCACTTGTTTTTGGCTGGACTGAGAGATATAAGGCTGCAATAGGTGTGGCTGAGGCTCTGGACTATCTGCATAACAATGGTACTCACTCTGTGATCCACAGGGATGTGAAGTCATCAAATGTATTATTATCTGAGGACTTTGAGCCCCAGCTCTCTGATTTTGGTCTTGCTAAATGGGCTTCCACCCCATCTTCACACATAACCTGCACAGTCGTTGCTGGAACTTTCGGTTACTTGGCTCCAGAATACTTCATGTATGGCAAAGTCAATGCCAAGATTGATGTGTATGCATTTGGTGTCGTACTCCTGGAACTTCTTTCTGGAAGAAAACCCATAGGTGGAGATTACCCTAAAGGTCAAGAGAGCCTCGTCATGTGGGCAAGGCCCATTCTTAATGATGGAGAGGTGTCACAGTTGTTAGATCCAAGTTTGAGCGATAACTGTGATCATGAACAGATAGAGAGGATGGCGTTGGCAGCCAAACTTTCTATAAGACGTGATCCAAGAGCCAGGCCTCCTATGAGCCTTATTTCAAAGCTTCTTCAAGGGGATGTTGATGCAATCAAGTGGGCAAGGTTAGAAGTTAACGCTTCGGAGAAGCCGGGGATGCTTGACGATGAAGAGTATCCACCTTCAAATTTGCAGTCACATCTTAATGTTGCACTGCTTGACGTGGAAGATGACTCGTCCATGAGCAGTGTTGAGCAGAAAGTGTCGTTGGAGGACTACTTAAGAGGGCGATGGAGCCGCTCATCCAGCTTCGACTGA 2226 0.4403 MKILQMGEAGEVHGGSSDGRTVVVGMKLDSASKELLTWALVKVAQPGDVVVALNVLGNNQIVDRDGKLSLLSLVNAFDSVLAVYEGFCNLKQVDLKLKVCRGPSVRKILIREANAYSATHLIVGTAHGLHTIRPSTSVAKYCAKKLSRNCCVLAVNNGKVVFKRDGSPATPHSKGIDRQNKIGLLETIHRTFNKSSKVLNDDNTENKHGKDFLGSKESVIEKPRCSICCSVSALPNMSCHHSAEKPSGDGGTNENALAIVPVQTTETGSSTATTLSDRELPELKPGWPLLQRKVLSDRESNDPSSMCQISVVQWAMQLPCRNLSYDTADHDHKQAIALDGRSGAIVPVDVLIRTDSSSPDGNSKGIPKELEDLHEKYSSSCRLFQYQELVRATSNFSRENLIGKGGSSQVYRGCLPDGKELAVKILKPSDDVLKEFLLEIEIITTLHHKNIISLLGFCFEDGNLLLVYDFLPRGSLEDNLYGSKKNPLVFGWTERYKAAIGVAEALDYLHNNGTHSVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTPSSHITCTVVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLSGRKPIGGDYPKGQESLVMWARPILNDGEVSQLLDPSLSDNCDHEQIERMALAAKLSIRRDPRARPPMSLISKLLQGDVDAIKWARLEVNASEKPGMLDDEEYPPSNLQSHLNVALLDVEDDSSMSSVEQKVSLEDYLRGRWSRSSSFD 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2437 741 PANTHER OS08G0249100 PROTEIN 214 680 IPR046958 -
Acco10g2437 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Acco10g2437 741 ProSiteProfiles Protein kinase domain profile. 396 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2437 741 ProSitePatterns Protein kinases ATP-binding region signature. 402 424 IPR017441 GO:0005524
Acco10g2437 741 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 365 470 - -
Acco10g2437 741 SUPERFAMILY Protein kinase-like (PK-like) 377 666 IPR011009 -
Acco10g2437 741 Pfam Protein kinase domain 397 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2437 741 Pfam Universal stress protein family 20 148 IPR006016 -
Acco10g2437 741 Gene3D HUPs 19 157 IPR014729 -
Acco10g2437 741 FunFam Putative receptor-like serine/threonine-protein kinase 471 683 - -
Acco10g2437 741 Gene3D Transferase(Phosphotransferase) domain 1 471 680 - -
Acco10g2437 741 CDD USP_Like 21 155 - -
Acco10g2437 741 Gene3D Phosphorylase Kinase; domain 1 363 470 - -
Acco10g2437 741 SMART serkin_6 396 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2437 741 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 156 - -
Acco10g2437 741 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 19 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2437 Acco-ChrAcco10 35875526 35878638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2437 384 740 Trihelix Transcription Factor Family AT1G70460 39.835 9.92e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Acco10g2437 Pkinase 3.9e-42 CL0016