Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2436 ATGGGCTCGTGTGAGAGAATGGTAATGGAAGGCGATGTGACTCGCATGCCTATTATCACGAAGCATTGTTCAGAGTTTCCATTGCAATCTGTTCCCGTGGGGCAGTCCTGTTCAGAAGTAGGCTGCTCTGTGTTGGAGTCTAACATTGACCTTTCCAATATTCTGGACAGTTGTAAATATTTCTCTACAAATGAAGAATCTGGCTCTGCAAACTCTGTTGATGTTACCGACATGCCCATCAATGCTAGAGTAAGTGAATATGAAGATGCTGATATGTTTCTAGTGGAGAAAAATTTGGACAACGATTGTCAGAACTGTTGCAGGACATTTTGTGGGCAATGTGAAGTTTATAACCTAGAAAATGGTAGCTTATGCACAGAAGAAAAAACTCACAATCATGATTACTACCAGCTTCTATCAGAGTTTAAATCTGTAAACGGTTTGCCAAAGGATATGGAGAGCAATAGAATCCCTTCTGCAGCGGACAATTTAGTGGCTGTGGAAGAAAAACAAAATAATTCTGGTTTACTCACTGATACTGGCAATCATATGTTTGATTCCATTTATTCTGAATTTTCCTTGGAATCAGAACCTCTACCTGGCTGTCTAGTCAATTTTTTCCAAAAGAGTGATCACGAGGACATTCTGAGAAATACAGATCCCTTGGAAGTTGCAGGCAACTGCAATACTTCAGTTGGGATGGAAGTAACTGCTTGCATGCAGATATCTCCCGCACAGGGAAGTGAATTGCCTTCTGATGCATTATATACAGATGCATTATGTGGGATAAAAGTGGCTGATTGCAACCAAACATCTTTGCATGCTAAGAGCTCTAGTGATAAGCTTAAGCTGAGTGATCAGAAAGATGGTGGCGATTGCAACAGTCCTAATGAAGAATGGGTCAAAGACACTGTTGAGAAAAAGAGTATCATAGATGCATGTGCACAAGTGTTGTCCCCGCCGACCTACCAGAGTACGTTGGGGAGTTCAATGTTAGCTTATTCGAGTGAGGCTACACAATTGGAACAGGAGACTGATAAGAGTGACATTGATTCTTATGAAGATGCCACAAAATTTCTGGAGCAAAATGTTGATGGGTTAAATGAAAGAAATGTTGAAATGAAGTACCATACATTGCAAATAGAAGGCAATTCCTCCAAATTGAAGGACAATTTGCCAAAAAATTCTACCTATTGTACCTTTTCTTCTGAATCAGGTCTGCCCTCCTTTGTTTCAGTAAATGATAACCCTTCAAAGGATGTGCCTGATCCCCTGCTTAAGGACGATAGCTGTGCTATCAGTTATCATAACAGTGTGTGCAATTCTGGACAGAAAAAAGGAAAGCAAAATGCCAAAATTGATTGTGTCACTAAAAGCAAATGTTCAGATATTGTGTCACTGCCCCGTCGAAGGAACAGTCGACAAAACAAGTCTGTTTGTAAGCAACAGACTAGAAGGGCTCCAAGAAAATGCAATAAGCTAGCCAATGTGCCTCAACACGAGTGGGGTGAAGAGACAATCTCAAAGACCTCTAGAAAGAAAAGAAGCTGTTTCTCCAGAGCAGCCCGCTCTTCTGAGTGGGGATTGCTAGGGAACATTAAACAGGCTATTGGAATGGATAGAGAGTTAAACACAAATAAAGATATGCTTGAAGGATCGGCGAAGGCTAGGGGCAGATTTCAAAGTGGAAAAACCAATAAAGATAGTGAAAATTCTAACACATCCAATTCAATGTTTTCTGCTTCAACCTCTGGTATGCGTCTGAAGATCAAAGTGGGGAAAGGTTTTAACTTATATTACCCAAATGCCCTGGTTCCAGAATTTGTTTATGGCTTGACTTCTGCTTCCAACTTGGGACCTGGTTCAAGTTCGCAAAATTTAGGTAGCAAAAATGGAGACAAATTATTTGAAGAAGTGGCTATGAGAAAGTCTGAATCTGATAAAACTAACCTTTACAAGCATGCTGTTGTTTTGAATGGGCAAATTGCCAACAACTTAGAAAGTGCTGCACCAATGGAGAAGTCAGATGGCAATGCAGAAGAGCCTTGTCTTGTGGCTCCTTCAAATAAGTTGGTTGATGCATTGATAGAGCCTGTCAATATTAAGAGTATGGATCCTGGAACTGGAACTTCACCTGATTCAGAAGTGATTGATTCCATTCCTGATGTCCAGGTGGGAGAAAGGCATCGGGAAGATCTGAATAATACTGATTTTGGTTTTAAGGAGTTTAATTTTGCTGTTCATAATACTGCTAGCAAGAGAAGGAAGAAGAAAGATAAACCTAGTTGTTCACGTAATAGTAGTGTAAGAATTGTATCAGCAGGTTCCCCAAGGAAAAATAAAGCAGATTACTCAGAGAATCTTGGAGGTAAGAAGAACTGCACTGATGTGGTTAGCTCTCTGGATTTGCCTAGTTCCACTGATATAAATACATTAAGCACAAGCAGTTCTGAAGACTGTGGAGTTCATACAGAACCATTGCACCTCTATGGAGATATTGGACTTAGAGATCCAACTGACGTGTTGGAAGTCAAAAGTAGTGTCAAGGTTGAGGCACTTTGCAGCCCAGATGTTAACAGTGAATATTCGGGCTCCCCTGGTTCTGAGAAATTTCTGCCTTCTGAGAGACATTTGGATTCTAATCTTCCCAAAAGTCTTAAATCTAATAATGTCAGCAAGACCAAGTCTAAAGCTTCCAAGTCAAAGAGCAGGAAAAAGACTGCTTGTAGGCGTGGGAGGAAACTGGGGAGATCTGTCACCAAGTGTGGTGTTAAAGGAAATTGGGTCTCTGATAAAGTTATATGTGAAACAGAAGACTACCTACATGAAGAAAATGACACTGAAGAAATACAGAAGTTGGATTTCGGTGGAAAAATTAATGCTGATGAGAACAAAGTATCAGCCAGTCCAGACATGGTACCTGGTGTTGGTCCCGGGGAGCAGCATCCATCACCACAAAAGGCATGGGTGCGTTGTGATGATTGCTACAAGTGGCGGCGTATTTCTACTTCACTTGCTGACGTAATTGAAGAAACAAAATGTGCCTGGACATGTAAGGATGGCAGTGAGAAAGCTTATGCTGATTGCTCTATCGCACAAGAAAAGTCAAACGCAGAGATCAATGCAGAGTTAGGATTATCATATGCATCTAGTGAAGAAGACAATAATGAAGATCGCAAAAACTATAAGGAGCCTGAACATCAACGTCCAATGTCTTCTCAGGAATCAACTTTTACTCATATCTCTGCCAATGAGTTTCTGCATCGTAGCCGCAAAACTCAAACTATAGATGAGATAATGGTTTGCCATTGCAAGCCACCTCTAAGAGGTCAGTTGGGATGTGGAAATGAATGTCTAAACCGGTTGCTTAACATTGAATGTGTTCAAGGGGCCTGCCCATGTGGGGATCTCTGTTCAAATCAGCAGTTCCAGAAACGCAATTATGCCAAACTGAAGTGGTTTAAATGTGGGAAAAAGGGCTATGGGCTGAAGGCGATTGAGGACATATCTGCAGGGCAATTCCTTATTGAATATGTTGGCGAGGTGCTTGATATGCATGCCTATGAGGCACGACAAAGTGAATATGCTTTGAAGGGTCATAGACATTTCTACTTCATGACTGTGAATGGCAGTGAGGTGATTGATGCAAGTGCAAAAGGAAATCTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTTGTACAGAAAAGTGGATGGTGAATGGAGAAATCTGTATCGGTCTGTTTGCATTGAGAGATATTAAGCAGGATGAAGAAGTGACATTTGACTACAACTATGTTAGGGTTTTTGGCGCTGCTGCAAAAAAATGTTATTGTGGTTCACCTCATTGTCGAGGTTATATAGGAGGTGATCCACTCAATGCTGAAATCATTGTTCAAGATGATTCAGATGAAGAATTTCCAGAACCTGTGATGCTTACTGAAGGTGATATTGAAGACGGGCCTGGTGGTCACACAGAGAAGGAGAATTCTCTAAACCCTGCCTCTGCCAGCTCTCAGAACAGCCTGATAGAAGTGGAAAATTCTAAGGGAAATTTGTCATCTTTCATTCAAATGAAAGTACTTTCCCAGCAAATGGATGATGTAAGAAGAAAACCTACGCCTGCCTTACAACAAGGATCTGCAGTAGAATCTGAGCATTCTGACAAAACTTTGATTCCGAATATGGGGACTTCCTCTTCATCTCCTCTTCATTTGCTTGTGAAGGCTTCTCAAAAAAATGGTTCTGTTAAAAAAGGGAAGTCGTGTGTTAACCCTACAAATAATCCTAAAGTTGGAGTGACCACCAACAGAATGCAGGTTCCATCCATCAAACATAAAAAAACAGTGGAAGGTTCTTCGAATGGCTGTTTTGAAGCAGTTGAGGAGAAGCTTAAGGAGTTGCTAGATCCAGATGGAGGAATTAGCAAAAGTAAAGATGCCACCAAAGGCTACTTGAAGCTTCTGCTTCTTACTGCGGCATCAGGTGATAGGAGTAATGGTCAAGCCATTCAAAGCAATCGAGACCTTTCCATGATTCTTGGGGCCCTTTTGGAAACAAGATCAAGACCTGTGCTGAATGATATAATTAAAAAAAATGGTTTACGCATGCTACACAACATAATGAAGCAATACAGGCGTGACTTTAAAAAAATTCCAATTTTGCGAAAGCTTCTTAAGGTCCATCAGATTGCTCGAAGCTTTCGAGACAGATGGATTCCTAGATCTCTCAGAAAACGTGGCTTTATAAACAGGGATGACTCGGGGGTGAAATCTTATAGGAGTTTCAAACGCAACAGATTTTCAACATCACCGAACAATACATGTGAACAGAGATTGAGACCTCCTAAAGCAATAGATTGTGCCCAGCCGTCATCGGTTGAAACAAGTTCAGTCAATGCTGCTGCCCAGGTGGACTGCTCCGCCCCATCTTTGAATGGGTGTGAAATCAGTGGGCAAATGAGACGTAAACGTAAAAGTCGATGGGATCAACCAGCTGAGACAAATTCAGTTGTAGTATCTCCTGAGCACAAGAAAGGAAAAGTTGTCTTTGGGCAGAATATTTCTGAAGATGTTCCGCCAGGGTTTTCATGTTTATTCCAGCTTTTGGGTTCTTCAAATGCCTCGAAGAATTCTGGTGATCTTGCTTTGCAACCTCCGGACCATTCTGGTTCTGGATGTCCCTCTGATGCAGTTATAGGCAATCCAAGCGAAAAATTTAATCCTCGCTTGCCTGTCTCGTATGGAGTTCCATGGCCTGCTATCCAACAATATGGAATACCACAGGTGGAAAAGGAAGGCAGTTGGGTCACTGCACCAGGCATGCCTTTCTATCCGTTTCCTCCACCACCCCCGTATCGAACCCAGAATGACTGTCAATCTTCCAAGCCTACTGATGCTATGAAAATAGACCAGCCTGCAGAAGTTGTGAGGCCAGATTCTAGTGGTCTAGCTAATTATTACTCGGATGATATGGCACCCAGCACAACTGGTTTTGGTGTTAAAGACCTTTCATATGAGGATAATAATCACATCTCTAAACCATTGAAGAGTTCCCCCGATGATCTGGGGAGGAGCTTCTTTAGGCAACAAATATGGAATAAATCAAAAATACCTCGACCGTGGTCCCGGAGGAAATTCTGGGTACATGATGAGAACAACCCTAGGGGTGGTTCGGGCAATTTGTGA 5691 0.4171 MGSCERMVMEGDVTRMPIITKHCSEFPLQSVPVGQSCSEVGCSVLESNIDLSNILDSCKYFSTNEESGSANSVDVTDMPINARVSEYEDADMFLVEKNLDNDCQNCCRTFCGQCEVYNLENGSLCTEEKTHNHDYYQLLSEFKSVNGLPKDMESNRIPSAADNLVAVEEKQNNSGLLTDTGNHMFDSIYSEFSLESEPLPGCLVNFFQKSDHEDILRNTDPLEVAGNCNTSVGMEVTACMQISPAQGSELPSDALYTDALCGIKVADCNQTSLHAKSSSDKLKLSDQKDGGDCNSPNEEWVKDTVEKKSIIDACAQVLSPPTYQSTLGSSMLAYSSEATQLEQETDKSDIDSYEDATKFLEQNVDGLNERNVEMKYHTLQIEGNSSKLKDNLPKNSTYCTFSSESGLPSFVSVNDNPSKDVPDPLLKDDSCAISYHNSVCNSGQKKGKQNAKIDCVTKSKCSDIVSLPRRRNSRQNKSVCKQQTRRAPRKCNKLANVPQHEWGEETISKTSRKKRSCFSRAARSSEWGLLGNIKQAIGMDRELNTNKDMLEGSAKARGRFQSGKTNKDSENSNTSNSMFSASTSGMRLKIKVGKGFNLYYPNALVPEFVYGLTSASNLGPGSSSQNLGSKNGDKLFEEVAMRKSESDKTNLYKHAVVLNGQIANNLESAAPMEKSDGNAEEPCLVAPSNKLVDALIEPVNIKSMDPGTGTSPDSEVIDSIPDVQVGERHREDLNNTDFGFKEFNFAVHNTASKRRKKKDKPSCSRNSSVRIVSAGSPRKNKADYSENLGGKKNCTDVVSSLDLPSSTDINTLSTSSSEDCGVHTEPLHLYGDIGLRDPTDVLEVKSSVKVEALCSPDVNSEYSGSPGSEKFLPSERHLDSNLPKSLKSNNVSKTKSKASKSKSRKKTACRRGRKLGRSVTKCGVKGNWVSDKVICETEDYLHEENDTEEIQKLDFGGKINADENKVSASPDMVPGVGPGEQHPSPQKAWVRCDDCYKWRRISTSLADVIEETKCAWTCKDGSEKAYADCSIAQEKSNAEINAELGLSYASSEEDNNEDRKNYKEPEHQRPMSSQESTFTHISANEFLHRSRKTQTIDEIMVCHCKPPLRGQLGCGNECLNRLLNIECVQGACPCGDLCSNQQFQKRNYAKLKWFKCGKKGYGLKAIEDISAGQFLIEYVGEVLDMHAYEARQSEYALKGHRHFYFMTVNGSEVIDASAKGNLGRFINHSCDPNCCTEKWMVNGEICIGLFALRDIKQDEEVTFDYNYVRVFGAAAKKCYCGSPHCRGYIGGDPLNAEIIVQDDSDEEFPEPVMLTEGDIEDGPGGHTEKENSLNPASASSQNSLIEVENSKGNLSSFIQMKVLSQQMDDVRRKPTPALQQGSAVESEHSDKTLIPNMGTSSSSPLHLLVKASQKNGSVKKGKSCVNPTNNPKVGVTTNRMQVPSIKHKKTVEGSSNGCFEAVEEKLKELLDPDGGISKSKDATKGYLKLLLLTAASGDRSNGQAIQSNRDLSMILGALLETRSRPVLNDIIKKNGLRMLHNIMKQYRRDFKKIPILRKLLKVHQIARSFRDRWIPRSLRKRGFINRDDSGVKSYRSFKRNRFSTSPNNTCEQRLRPPKAIDCAQPSSVETSSVNAAAQVDCSAPSLNGCEISGQMRRKRKSRWDQPAETNSVVVSPEHKKGKVVFGQNISEDVPPGFSCLFQLLGSSNASKNSGDLALQPPDHSGSGCPSDAVIGNPSEKFNPRLPVSYGVPWPAIQQYGIPQVEKEGSWVTAPGMPFYPFPPPPPYRTQNDCQSSKPTDAMKIDQPAEVVRPDSSGLANYYSDDMAPSTTGFGVKDLSYEDNNHISKPLKSSPDDLGRSFFRQQIWNKSKIPRPWSRRKFWVHDENNPRGGSGNL 1896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2436 1896 SMART set_7 1149 1272 IPR001214 GO:0005515
Acco10g2436 1896 MobiDBLite consensus disorder prediction 1416 1436 - -
Acco10g2436 1896 Gene3D SET domain 1040 1305 IPR046341 -
Acco10g2436 1896 ProSiteProfiles Post-SET domain profile. 1274 1290 IPR003616 -
Acco10g2436 1896 MobiDBLite consensus disorder prediction 565 580 - -
Acco10g2436 1896 ProSiteProfiles Zinc finger CW-type profile. 983 1037 IPR011124 GO:0008270
Acco10g2436 1896 MobiDBLite consensus disorder prediction 555 580 - -
Acco10g2436 1896 Gene3D - 979 1039 - -
Acco10g2436 1896 MobiDBLite consensus disorder prediction 751 789 - -
Acco10g2436 1896 MobiDBLite consensus disorder prediction 1377 1403 - -
Acco10g2436 1896 Pfam AWS domain 1112 1146 IPR006560 GO:0005634|GO:0042054
Acco10g2436 1896 ProSiteProfiles SET domain profile. 1149 1266 IPR001214 GO:0005515
Acco10g2436 1896 Pfam CW-type Zinc Finger 989 1035 IPR011124 GO:0008270
Acco10g2436 1896 MobiDBLite consensus disorder prediction 1047 1076 - -
Acco10g2436 1896 SMART shorttest3 1097 1148 IPR006560 GO:0005634|GO:0042054
Acco10g2436 1896 CDD SET_SETD2 1148 1290 IPR044437 GO:0010452|GO:0046975
Acco10g2436 1896 ProSiteProfiles AWS domain profile. 1097 1147 IPR006560 GO:0005634|GO:0042054
Acco10g2436 1896 PANTHER SET DOMAIN PROTEINS 703 1669 - -
Acco10g2436 1896 SMART PostSET_3 1274 1290 IPR003616 -
Acco10g2436 1896 Coils Coil 350 370 - -
Acco10g2436 1896 MobiDBLite consensus disorder prediction 470 490 - -
Acco10g2436 1896 MobiDBLite consensus disorder prediction 1317 1342 - -
Acco10g2436 1896 MobiDBLite consensus disorder prediction 1379 1403 - -
Acco10g2436 1896 MobiDBLite consensus disorder prediction 897 914 - -
Acco10g2436 1896 SUPERFAMILY SET domain 1076 1287 IPR046341 -
Acco10g2436 1896 FunFam Histone-lysine N-methyltransferase 1048 1304 - -
Acco10g2436 1896 MobiDBLite consensus disorder prediction 1052 1070 - -
Acco10g2436 1896 MobiDBLite consensus disorder prediction 857 914 - -
Acco10g2436 1896 Pfam SET domain 1160 1266 IPR001214 GO:0005515
Acco10g2436 1896 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2436 Acco-ChrAcco10 35860089 35871359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2436 1132 1289 C2H2 Transcription Factor Family AT2G23740 34.286 1.33e-20 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco10g2436 SET 1.5e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2436 10 35860089 35871359 Acco10g2436 10 35860089 35871359 ECH