Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2427 ATGGCTAAGCCATTATTGGTCTTCCTTTCCCTCCTCATCTCCCTTGTCTTCTCCACCTCGCGTGCTGATTCACCTTCTTCTTCTTCTTCTTCTTCTTCATGTCCCTTCGATCTCACCTACGTCCGAACCTTTCCCTGGGACAGTTCAACTTGCCTTCATGTTGACCCGAAAAATAATGGAACCGAACACTGTTGCCAAACCCTCCTCAGCCTCCTCGGAGTTGGCCTTGCTCAGCACCTCAAAGACACCTCTGTCTTCGAACTTCCCGATGTTAACACTTCCTCTTCTTGTCTCTCTGATTTCAGTACCAAGCTTTCAGCTTTATCAATCCACGCCGATATGGTCTCTACTTGCTTCCAGAACTCGACCCAGTTCGTTGCCAATAACGCTAGCTGTGCAGGAATTAAGACGGCCCAGGATTTTGTTTCAAAGGTTGGCCTGATGACACCTTTAGATACATCTTGTAAAGGTGACCTCATGGGGCTAACTCGATGTGGTATTTGCCTTGATGCTGGCTACAAGGTCACTTCCCATTTGACTGACATGGATCCAAAAAACTCATCTAAATGTTTTTACTTCACAATCTTGTATGCTGCTGTTTTTGTTAATGAATTTGGTCCTAAAGATGTTAGAACAGCTAGTTGCATACTTGGTATGCCTCTGTCCAGTGCTGCAACAAAAGGGTCGTCAAACAGAGACCGTACTCTCAAGTTGAGTTTTGGGTTATTGGGTGCGGTTACTGGTATTCTTCTTTCTTTTCTTCTTTTTGTTGTGTATAGGAAGTGGGATAGGAGAAGGAGGGAAAGTATTCATCACAGGGAAGTTGTGAGCAGCGTGAGGGCCAATGTTTTACCTTACACTGGGGCCAAATGGTTTCAATTGTCAGAGCTTGAAAAAGCCACTGATAAATTTTCAAAGAGGAATCTGATCGGTCAAGGATCTGATGGTGTTGTTTACAAAGGAACTCTTCAGGATGGCGCTTTGGTTGCAGTCAAAGAGATTTTTGATTCGGAAACCAAAGGGGATGATGAATTTTGCTATGAAGTTGAGATCATCAGCAAAATAAAGCACAGGAATCTTGTGGCTCTTCGAGGTTGTTGTGTCACAAGTGATAACTCCAAAGGTAAAAGGAGATTCTTGGTTTATGATTATATGCCGAATGGTAGCCTAAGTTACCAATTATCTCTTTCTGGAGCTAATAGGCTAACATGGCCACAGAGAAAGAACATAATTCTTGATGTGGCTAAAGGGCTTGCTTATCTGCATTATGAGATCAAACCCCCAATTTATCACCGTGATGTAAAGGCCACCAACATACTTTTAGACTCCACAATGAAAGCTAAAGTTGCAGATTTTGGATTGGCCAAGCAGGGCAATGAAGGCCAGTCTCATCTCACCACAAGAGTTGCTGGCACGTATGGTTATTTAGCACCAGAGTATGCTCTCTATGGGCAACTAACAGAGAAGAGTGATGTTTATAGCTTTGGAATTCTGATTCTTGAAATCATGAGTGGAAGAAAGGTGCTTGACACTTCAAACTCGTCGATTCTTTTGATCACAGACTGGGCTTGGACGCATGCGAAGTCAGGTAAGATAGAGGAAATATTGGACGAATCAATAAGAGAAGGAGGGCCAAAGAGGATAATGGAGAGGTTTGTTCTTGTTGGGATTCTCTGTGCTCATGTGATGGTGGCTTTGAGGCCTACCATTTCTGAGGCTCTCAAGATGCTTGAAGGTGACATTGACATTCCCAATTTACCAGACAGACCAGTGCCTCTGGGTCATGAGTCCTTTCAATCTTCTCTTTTGTATGGCTTCACAAGAAGTGGAAGATCTACACCGTTTGGTTCATCAATTCAAGTGTGA 1866 0.4346 MAKPLLVFLSLLISLVFSTSRADSPSSSSSSSSCPFDLTYVRTFPWDSSTCLHVDPKNNGTEHCCQTLLSLLGVGLAQHLKDTSVFELPDVNTSSSCLSDFSTKLSALSIHADMVSTCFQNSTQFVANNASCAGIKTAQDFVSKVGLMTPLDTSCKGDLMGLTRCGICLDAGYKVTSHLTDMDPKNSSKCFYFTILYAAVFVNEFGPKDVRTASCILGMPLSSAATKGSSNRDRTLKLSFGLLGAVTGILLSFLLFVVYRKWDRRRRESIHHREVVSSVRANVLPYTGAKWFQLSELEKATDKFSKRNLIGQGSDGVVYKGTLQDGALVAVKEIFDSETKGDDEFCYEVEIISKIKHRNLVALRGCCVTSDNSKGKRRFLVYDYMPNGSLSYQLSLSGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDVKATNILLDSTMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGILILEIMSGRKVLDTSNSSILLITDWAWTHAKSGKIEEILDESIREGGPKRIMERFVLVGILCAHVMVALRPTISEALKMLEGDIDIPNLPDRPVPLGHESFQSSLLYGFTRSGRSTPFGSSIQV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2427 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Acco10g2427 621 FunFam Receptor-like serine/threonine-protein kinase At4g25390 269 384 - -
Acco10g2427 621 SUPERFAMILY Protein kinase-like (PK-like) 288 593 IPR011009 -
Acco10g2427 621 SMART serkin_6 304 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2427 621 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Acco10g2427 621 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 385 585 - -
Acco10g2427 621 PANTHER OS01G0750732 PROTEIN 55 585 - -
Acco10g2427 621 ProSiteProfiles Protein kinase domain profile. 304 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2427 621 Gene3D Transferase(Phosphotransferase) domain 1 385 583 - -
Acco10g2427 621 CDD STKc_IRAK 310 579 - -
Acco10g2427 621 Pfam SPARK 29 190 IPR043891 -
Acco10g2427 621 Pfam Protein kinase domain 305 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2427 621 Gene3D Phosphorylase Kinase; domain 1 265 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2427 Acco-ChrAcco10 35793371 35795236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2427 27 599 Receptor kinase-like Gene Family AT1G11050 53.152 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Acco10g2427 Pkinase 6.3e-45 CL0016