Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2423 ATGTCAACCCAGAATCGGCGTCCATCGTTTTCCTCATCGACGACGTCGTCTTCGGCAAAGAGGCTTGCACCGTCGTCGGAGAATGTGGGGAAGGTTATGGCAGCCCCTCCACACTTGGCCAAGAAGCGAGCGCCCCTCAGTTACCTGACCAATCAAAAGAATGCGTCCCGCAGTGCTTTGCGGAAGTCACTGCCATCATCTACTTTGGTACAATGCACAACCAAAATTACTCAGACAAAGAAGAAATTCCCTGCTCGCACCACAAACTCAGCCATTTCCGGGATTAAAGTGCCTACTTCGTCAAATGCTAAATCGACTTCAGCTGGTTTTCCCAAGGCCACTTCTTTCCCTCAAAGGGATGAAAGTGCTTCTACTGCTGCTGCTCTTCCTTGCAGCATGGATTCTTCTCCTATCAAATCAGATAAGATGTCAGTTTCTTTGGATGAGACGATGTCGACTTGTGATTCTTTCAAGAGTCACGAAATTGAATATATCGACAACAGCGATGTTTCAGCTCTTGGTTCTATTGACAGAAAGACATTCAACAATCCGAACACCTCAGATAATATGGAGGCGCCAGTTAATGTTTGTAGTAGAGATATACTTGTTGACTTGGAAAGAGACGGCAAATTTGTCAATATCGATGACAACTACTTGGATCCCCAGCTTTGTGCATCCTATGCATGTGATATCTACAAGCATTTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAGGACATCAATTCCAACATGCGTGCTATATCAGTTGACTGGCTCGTGGAGGTAGCTGAAGAGTATAGGCTTCTGCCTGATACATTGTATTTGACAGTCAACTACATAGATCGGTATCTTTCAGGGAATGTGATGTGTAGGCAGAAGTTACAATTACTTGGCGTTGCTTGCATGATGATTGCCGCTAAATATGAGGAGATTTGTGCGCCTCAGGTGGAGGAATATTGTTATATAACAGATAATACATACTTCAAAGAAGAGGTTTTGCAAATGGAATCAGCAGTCTTAAATTATCTAAAGTTTGAAATGACAGCTCCAACAATAAAATGTTTCTTAAGACAATTTATTCGTGCAGCTCAAGCAGAGAGCGAGGTGGCATCATTACAATTAGAGTTCTTGACCAACTATATTGCTGAGTTGTCTCTACTGGAGTATGCAATGCTCTGTTATGCTCCATCACTTATAGCAGCTTCTTCAATATTCCTGGCGAAAGTCATCCTTTTCCCTTCAAAAAAACCATGGAATTCAACATTGCAGCATTACACACTGTACAAGGCTTCTGATTTGCGTAACTGTGTGAAGGATCTCCATCGTCTATGTTATAACAGCCATAGTTCTAGCTTACCTGCAATCCGAGAGAAATACAGTCAGCACAAGTACAAGTATGTAGCAAAGAAGTCGTGTCCTCCGTCAATCCCTCAAGAACTTTTTCAAAGTCAAGATCTAGTTTACCTGATGAGTTTCCTGAGGCCCTCAGCATTGTACGCCTTTCTTATTACATGTCCTTCCTTCAGATGGATGCCCTGTCAGAGTTGGGGCTTCCTTCGATGGCCCGGTTTCGATGGCTTCTTGAGACCTTTGGTGATGTTCCTTCTCTGGACCATGTTTTTGGAGCTCCGCTTCATACCTTCATCCTCTATGCACCCGACTCTTACAGCTGGTGATCGAATCATTGTCGAGAAGGCTTCGTATTACATCAGGAGTCCTGCCGTACAGGATATTGTATTATTCCGAGATCCAACACAGCCATCTGGAGACAAAGCAGCAGAAATATTTATCAAGAGAGTTGTTGCAAAAGCAGGAGATCTTGTTGAGGTTCGTCATGGGTCTCTCTACATTAATAGAGTTGCTCGGAAGGAAGATTATGTGGCAGCACCGCCAACATACACAACAAACTTAACTTATGTACCAAGCGGCCATGTTTATGTGTTAGGTGACAATCGAAACAACAGCTACGATTCCCATGTTTGGGGACCACTGCCTGTGAAAAACATAGTGGGGAGATATGTCATGCGTTGTCACAAACCCACAAACATCTGA 2079 0.4372 MSTQNRRPSFSSSTTSSSAKRLAPSSENVGKVMAAPPHLAKKRAPLSYLTNQKNASRSALRKSLPSSTLVQCTTKITQTKKKFPARTTNSAISGIKVPTSSNAKSTSAGFPKATSFPQRDESASTAAALPCSMDSSPIKSDKMSVSLDETMSTCDSFKSHEIEYIDNSDVSALGSIDRKTFNNPNTSDNMEAPVNVCSRDILVDLERDGKFVNIDDNYLDPQLCASYACDIYKHLRASEAKKRPSTDFMERIQKDINSNMRAISVDWLVEVAEEYRLLPDTLYLTVNYIDRYLSGNVMCRQKLQLLGVACMMIAAKYEEICAPQVEEYCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTIKCFLRQFIRAAQAESEVASLQLEFLTNYIAELSLLEYAMLCYAPSLIAASSIFLAKVILFPSKKPWNSTLQHYTLYKASDLRNCVKDLHRLCYNSHSSSLPAIREKYSQHKYKYVAKKSCPPSIPQELFQSQDLVYLMSFLRPSALYAFLITCPSFRWMPCQSWGFLRWPGFDGFLRPLVMFLLWTMFLELRFIPSSSMHPTLTAGDRIIVEKASYYIRSPAVQDIVLFRDPTQPSGDKAAEIFIKRVVAKAGDLVEVRHGSLYINRVARKEDYVAAPPTYTTNLTYVPSGHVYVLGDNRNNSYDSHVWGPLPVKNIVGRYVMRCHKPTNI 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2423 692 Gene3D - 244 357 - -
Acco10g2423 692 SUPERFAMILY LexA/Signal peptidase 548 686 IPR036286 -
Acco10g2423 692 MobiDBLite consensus disorder prediction 1 64 - -
Acco10g2423 692 PANTHER CYCLINS 163 474 IPR039361 -
Acco10g2423 692 Gene3D Umud Fragment, subunit A 557 688 - -
Acco10g2423 692 SMART Cyclin_C_2 359 482 IPR004367 -
Acco10g2423 692 Pfam Signal peptidase, peptidase S26 540 684 IPR019533 GO:0004252|GO:0006465
Acco10g2423 692 MobiDBLite consensus disorder prediction 1 24 - -
Acco10g2423 692 MobiDBLite consensus disorder prediction 47 64 - -
Acco10g2423 692 MobiDBLite consensus disorder prediction 95 122 - -
Acco10g2423 692 SUPERFAMILY Cyclin-like 220 356 IPR036915 -
Acco10g2423 692 FunFam Peptidase/ serine-type peptidase 557 686 - -
Acco10g2423 692 PRINTS Bacterial leader peptidase 1 (S26A) family signature 548 564 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco10g2423 692 PRINTS Bacterial leader peptidase 1 (S26A) family signature 605 617 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco10g2423 692 PRINTS Bacterial leader peptidase 1 (S26A) family signature 649 668 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco10g2423 692 FunFam Mitotic cyclin 6 244 344 - -
Acco10g2423 692 ProSitePatterns Signal peptidases I signature 3. 654 667 IPR019758 GO:0004252|GO:0016020
Acco10g2423 692 ProSiteProfiles BRCT domain profile. 234 285 IPR001357 -
Acco10g2423 692 SUPERFAMILY Cyclin-like 359 484 IPR036915 -
Acco10g2423 692 CDD S26_SPase_I 551 681 IPR019533 GO:0004252|GO:0006465
Acco10g2423 692 FunFam Cyclin A1 346 478 - -
Acco10g2423 692 Gene3D - 230 478 - -
Acco10g2423 692 Pfam Cyclin, C-terminal domain 359 480 IPR004367 -
Acco10g2423 692 CDD CYCLIN_AtCycA_like_rpt1 220 355 - -
Acco10g2423 692 NCBIfam signal peptidase I 540 686 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco10g2423 692 SMART cyclin_7 266 350 IPR013763 -
Acco10g2423 692 SMART cyclin_7 363 451 IPR013763 -
Acco10g2423 692 ProSitePatterns Signal peptidases I serine active site. 557 564 IPR019756 GO:0004252|GO:0016020
Acco10g2423 692 Pfam Cyclin, N-terminal domain 230 356 IPR006671 -
Acco10g2423 692 CDD CYCLIN_AtCycA-like_rpt2 359 473 - -
Acco10g2423 692 ProSitePatterns Cyclins signature. 261 292 IPR006671 -
Acco10g2423 692 MobiDBLite consensus disorder prediction 95 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2423 Acco-ChrAcco10 35751826 35761239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2423 4 492 Core Cell Cycle Gene Families AT1G44110 61.789 0.0 562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2423 10 35751826 35761239 Acco10g2423 10 35751826 35761239 ECH