Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2420 ATGGAAAGCCAGCAGCAGCAGCAGGTTGGAGGTAGCAGGCGCATAGCAGCCGTGGATGCTTCTCCTCCGGCTATCGAAAATGCAGACTCAAAGCAACAGGAAAAACCCGGTTGGAAGAAGCTTTTGTCATTTATAGGTCCTGGTTTTCTGGTTTCCTTGGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTAACCACGGATATGAGCTGCTGTGGGTGATTCTCATTGGGCTCATCTTCGCCCTTATCATTCAGTCCTTGGCTGCAAATCTTGGCGTGAGCACTGGCAAGCACCTTTCAGAATTGTGTAAAGCAGAGTATCCACGTTTTGTCAAGTATTGTTTATGGATATTGGCTGAGCTTGCTGTTATAGCTGCAGACATCCCTGAAGTGATTGGCACCGCCTTTGCTCTCAACATACTCTTCCATATACCCTTATGGTGCGGAGTTCTATTGACTGGTTTGAGCACTCTCTTGCTTCTGGGTCTCCAAAGATTCGGGATAAGGAAGCTGGAATTGCTGATATCAACGATGGTACTTATATTGGCGGCATGTTTCTTCGGAGAATTGAGCTACGTAAGGCCACCAGCTTCTGGCGTGATCAAAGGCATGTTTATCCCAAAACTCACCGGTGAAGGAGCCACCGGCGACGCCATTGCCCTTATCGGTGCTCTTGTCATGCCGCACAACCTTTTTCTCCACTCTGCTCTTGTCCTCTCTAGAAAAATCCCCAATACCGTGCGTGGCATCAATGATGCATGTAAATATTTCCTAATAGAAAGTGGGATTGCTCTGTTTATAGCGTTTCTAATCAACGTGGCAGTGGTCTCTGTTTCTGGTGCTGTTTGTTCTTCCCCCAACCTTTCCAGCGAAAACGCAGATAATTGCAGCAATCTTACTCTTGACTCTGCTTCTTTCCTTCTCAAGAATATTCTGGGACGGTCCAGCTCAACCATTTATGCCATCGCACTTCTGGCCTCAGGCCAAAGCTCTGCTATCACCGGCACATATGCAGGGCAATTCATTATGCAGGGTTTCTTGGACTTAAAGATGAGAAAATGGACTAGGAACTTGTTGACTCGGACTGTTGCCATAACTCCTAGTCTTATTGTCTCCCTCATTGGTGGATCATCTGGGGCAGGACGGCTTATCATCATCGCCTCGATGATACTTTCATTTGAGCTTCCATTCGCTTTGATCCCTCTCCTCAAGTTTAGCAGCAGCAGCACCAAGATGGGTCCTCACAAGAATTCTATGATTATTATAATCATATCATGGATTCTGGGGGCAGGGATAATCGGAATCAATGTGTATTACCTGAGTACAGGGTTTGTGGGTTGGCTGATTCATAGCAGTCTACCAAAGGTGGCAAATGTGTTCATTGGGATCATAGTGTTCCCATTGATGGCCATTTACATTGTCGCAGTGATATACCTGACCCTAAGAAAAGACACTGTCAAGACTTATATTGAGGCTGAGGACGACCCTACAGTACAGAACCACATGGAAAAAGGGCTCATGGATCCTAATAATGCCCAGGTGGAGTTGGGTCATGCTCCCCGCAGAGTGGATTTAGCTGACGTCCCTTTCCCCCAATAG 1614 0.4684 MESQQQQQVGGSRRIAAVDASPPAIENADSKQQEKPGWKKLLSFIGPGFLVSLAYLDPGNLETDLQAGANHGYELLWVILIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPRFVKYCLWILAELAVIAADIPEVIGTAFALNILFHIPLWCGVLLTGLSTLLLLGLQRFGIRKLELLISTMVLILAACFFGELSYVRPPASGVIKGMFIPKLTGEGATGDAIALIGALVMPHNLFLHSALVLSRKIPNTVRGINDACKYFLIESGIALFIAFLINVAVVSVSGAVCSSPNLSSENADNCSNLTLDSASFLLKNILGRSSSTIYAIALLASGQSSAITGTYAGQFIMQGFLDLKMRKWTRNLLTRTVAITPSLIVSLIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIIISWILGAGIIGINVYYLSTGFVGWLIHSSLPKVANVFIGIIVFPLMAIYIVAVIYLTLRKDTVKTYIEAEDDPTVQNHMEKGLMDPNNAQVELGHAPRRVDLADVPFPQ 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2420 537 Hamap Divalent metal cation transporter MntH [mntH]. 23 449 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco10g2420 537 PRINTS Natural resistance-associated macrophage protein signature 148 167 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco10g2420 537 PRINTS Natural resistance-associated macrophage protein signature 333 352 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco10g2420 537 PRINTS Natural resistance-associated macrophage protein signature 223 246 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco10g2420 537 PRINTS Natural resistance-associated macrophage protein signature 393 412 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco10g2420 537 PRINTS Natural resistance-associated macrophage protein signature 361 378 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco10g2420 537 PRINTS Natural resistance-associated macrophage protein signature 173 194 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco10g2420 537 PRINTS Natural resistance-associated macrophage protein signature 120 146 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco10g2420 537 MobiDBLite consensus disorder prediction 1 33 - -
Acco10g2420 537 NCBIfam Nramp family divalent metal transporter 46 412 - -
Acco10g2420 537 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 26 493 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco10g2420 537 Pfam Natural resistance-associated macrophage protein 62 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco10g2420 537 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 39 415 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2420 Acco-ChrAcco10 35724880 35727835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2420 2 533 Inorganic Solute Cotransporters AT1G80830 59.065 0.0 631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2420 10 35724880 35727835 Acco10g2420 10 35724880 35727835 ECH