Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2419 ATGAAGAAGAGTATTGTTTTGAGATGTGATGACTATAAAAATAAGCTTTTGAAGATGGAGCACAAGGAGCAGTTGCTGGTGAAGTGGCGGTGGTGGTGGCTTCTGGCACTAGTTTTCACGGCGGCTTTTGTTGTCAGGGCTGAGGGAGGCAATGTCACCTACGACGGCAGGTCATTAATCATCAACGGAGAACACAAAATCCTTTTCTCCGGTTCAATTCACTATCCTCGCAGCACTCCTGAGATGTGGCCTTCCCTAATTTCCAAAGCCAAGGAGGGAGGCATAGATGTCATTCAAACTTACGTATTTTGGAACCAGCATGAGCATCTACAAGGCCAGTATGACTTCAGTGGAAGGCTTGATATAGTGAGGTTCATTAAGGAGATCCAATCACAAGGTCTATATGTGACCCTCAGAATTGGACCTTTCATTCAGAGTGAATGGACTTATGGAGGTTTACCCATTTGGTTACATGACGTTCCGGGCATTGTTTTTAGATCAGATAATGAGCCATTCAAGTATCACATGAAAAAGTTCACCACCCAAATAGTAAACTCGATGAAATCCCACAATCTTTTTGCTTCACAAGGAGGACCTATCATACTATCACAGATCGAGAACGAGTATGGTACGATTGAAGCGGCATTTGGCGAAGGAGGACCAAGCTATGTTCGTTGGGCTGCACAAATGGCCGTGGGGCTTCAAACTGGTGTGCCCTGGGTTATGTGCAAGCAAGATGATGCTCCTGATCCAGTGATCAACGCGTGCAATGGTATGGAATGTGGGAGGACTTTCAAGGGGCCTAACTCGCCTTATAAACCTTCCATCTGGACAGAGAACTGGACAAGTTTCTATCAGGCCTTTGGTGACGAACCATACTTGAGATCAGCTGAAAAGATTGCGTATAGTGTTGCTTTGTTCATTGCAAAGAACGGAAGCTATGTCAACTACTATATGTACCATGGAGGAACAAATTTTGGTAGAACAGCAGCTGCTTTTATGGTTACGGCTTATTATGATGAAGCTCCTCTAGATGAATATGGTTTAATTAGGCAACCAAAATGGGGTCATCTTAGAGACCTACATGCTGTAATCAAGTCCTGCTCAAAAACTTTGCTTTCTGCTACCCCGACTACTCTCAGCTTGGGCGGGCAACAAGAGGCCTATGTTTTCAGCAAGAGTAAAACAGAATGTGCTGCCTTTCTGGAAAATAGAGACCATAAAGAAGTCACTGTCCGATTTCAAAGCATGGCATATAAACTACCTCCAGGATCAATTAGCATTCTTCCAGATTGCAAGAGTGTAGCCTTCAACACTGCCCAAGTAAGAGCAAAACACAGTACAAGAACAATGAACCCTGTAGTACATCTTCAATCAGCCCAACAATGGCAAGTGTACCAAGAAGTCATCCCGAACTTCGGTCGTACTGTCTCAAGAGCAAACGGGCTAGTTGATCAGATCAGCGAGGCAAAAGATAAATCTGACTATATGTGGTATACTTTAAGGTTTAGTCAATCAAGTTCTCAGTCGCTTCTTAGTGCATCTAGCCATGGACATGTTTTGCATGCATTTGTCAATGGAGATTTAGCAGGTTCTGCTCATGGAAGTCACGACAATATATCTTTCACCTTGAAGAGCAATATCAAATTGAGAGAAGGAGTCAATCATATTTCCTTCCTCAGTGCAACAGTTGGATTGCCGGATGCTGGAGCATACCAAGAGCACAAAGCTGCTGGTTTGCGCAATGTCAGAGTTGGTGACACAGATTTCAGTCAGAATTCCTGGGGATATCAGGTTGGGTTACTAGGAGAATATCTACAAGTCTATACAGAGACAGGATCAAGTAAAGTTCAGTGGAAAAAGCTTAGAAGATCAAATCCACTGACGTGGTATAAGACCACATTTGATGCACCACCAGGAAATGATCCGGTGGCACTTGATCTTGGTTCAATGGGGAAGGGTCAAGTTTGGATTAATGGAGAGAGTCTTGGGCGATATTGGGTATCATTCGTCACGCCTAAAGGAAATCCTTCACAGAGATGGTACCACATACCTCGGTCCCTCCTGAAACCTTCTGGAAACCTACTAGTTCTGTTTGAAGAAGAAACTGGGAACCCCCTTAGGATTTCTCTGGACACAGTTACATGGTCCTGA 2154 0.4396 MKKSIVLRCDDYKNKLLKMEHKEQLLVKWRWWWLLALVFTAAFVVRAEGGNVTYDGRSLIINGEHKILFSGSIHYPRSTPEMWPSLISKAKEGGIDVIQTYVFWNQHEHLQGQYDFSGRLDIVRFIKEIQSQGLYVTLRIGPFIQSEWTYGGLPIWLHDVPGIVFRSDNEPFKYHMKKFTTQIVNSMKSHNLFASQGGPIILSQIENEYGTIEAAFGEGGPSYVRWAAQMAVGLQTGVPWVMCKQDDAPDPVINACNGMECGRTFKGPNSPYKPSIWTENWTSFYQAFGDEPYLRSAEKIAYSVALFIAKNGSYVNYYMYHGGTNFGRTAAAFMVTAYYDEAPLDEYGLIRQPKWGHLRDLHAVIKSCSKTLLSATPTTLSLGGQQEAYVFSKSKTECAAFLENRDHKEVTVRFQSMAYKLPPGSISILPDCKSVAFNTAQVRAKHSTRTMNPVVHLQSAQQWQVYQEVIPNFGRTVSRANGLVDQISEAKDKSDYMWYTLRFSQSSSQSLLSASSHGHVLHAFVNGDLAGSAHGSHDNISFTLKSNIKLREGVNHISFLSATVGLPDAGAYQEHKAAGLRNVRVGDTDFSQNSWGYQVGLLGEYLQVYTETGSSKVQWKKLRRSNPLTWYKTTFDAPPGNDPVALDLGSMGKGQVWINGESLGRYWVSFVTPKGNPSQRWYHIPRSLLKPSGNLLVLFEEETGNPLRISLDTVTWS 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2419 717 Gene3D Glycosidases 47 369 - -
Acco10g2419 717 FunFam Beta-galactosidase 597 717 - -
Acco10g2419 717 SUPERFAMILY Galactose-binding domain-like 426 575 IPR008979 -
Acco10g2419 717 Gene3D - 570 715 - -
Acco10g2419 717 Pfam Glycosyl hydrolases family 35 58 363 IPR031330 -
Acco10g2419 717 PRINTS Glycosyl hydrolase family 35 signature 62 79 IPR001944 GO:0004553|GO:0005975
Acco10g2419 717 PRINTS Glycosyl hydrolase family 35 signature 276 291 IPR001944 GO:0004553|GO:0005975
Acco10g2419 717 PRINTS Glycosyl hydrolase family 35 signature 83 101 IPR001944 GO:0004553|GO:0005975
Acco10g2419 717 PRINTS Glycosyl hydrolase family 35 signature 653 669 IPR001944 GO:0004553|GO:0005975
Acco10g2419 717 PRINTS Glycosyl hydrolase family 35 signature 138 157 IPR001944 GO:0004553|GO:0005975
Acco10g2419 717 PRINTS Glycosyl hydrolase family 35 signature 313 328 IPR001944 GO:0004553|GO:0005975
Acco10g2419 717 PRINTS Glycosyl hydrolase family 35 signature 195 210 IPR001944 GO:0004553|GO:0005975
Acco10g2419 717 PRINTS Glycosyl hydrolase family 35 signature 332 348 IPR001944 GO:0004553|GO:0005975
Acco10g2419 717 PRINTS Glycosyl hydrolase family 35 signature 626 640 IPR001944 GO:0004553|GO:0005975
Acco10g2419 717 SUPERFAMILY (Trans)glycosidases 50 368 IPR017853 -
Acco10g2419 717 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 197 209 IPR019801 GO:0004553|GO:0005975
Acco10g2419 717 FunFam Beta-galactosidase 318 444 - -
Acco10g2419 717 Pfam Beta-sandwich domain in beta galactosidase 372 442 IPR041392 -
Acco10g2419 717 FunFam Beta-galactosidase 48 369 - -
Acco10g2419 717 SUPERFAMILY Galactose-binding domain-like 593 715 IPR008979 -
Acco10g2419 717 PANTHER BETA-GALACTOSIDASE RELATED 41 715 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2419 Acco-ChrAcco10 35713774 35720927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2419 35 715 Glycoside Hydrolase AT5G63800 59.456 0.0 870