Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2417 ATGCAAACTAATCATCATTGCTCTGTTCCTAGTCGGCAACTAAAAACCTTGAGATTGTCAAGAATCTGGAATCTTAAGAATCCATCTCAAAAGGGTTTCCATTACTTGACATTAAAGTTTGTCCAAAACTATGCCTTCGCTCATTACCTCAAATACCAAACTCGCCTTGTCTCTGTTCAACGATCTCAACCCACATCCGTCAGTTGTAGCGGAACACCTTCTTCCTTCCTTATGGAACCAGAAAAGGGCAAACAGTCTTCCCACAAGACCCCATACACTGAGCTCGAGCAAGTCAACTCAGATTTCATCCTGGCAATCGCTTTGCAAGAGCAAGAGGGAACCTTCACAATGCTCGCCACCATGGACAGCGAAGAAAGCAGCAATGAAGATGAAAGTGAGTCCTCTTTTGAAGACGACGTTGAAGATGGAGATGCTGATGACTTTTCCGAGAGCCAAGAATTCGAATTAGGAGACCTTCAGCTTCTTGAGGGCGAAGGAAGCAATGACGATGACGACGATGAAGAAATGGAAGAAGAGGATGAGATTGATCCTGATGAAATGTCCTACGAAGAGTTGATTGAGTTGGCTGAGTTCGTAGGAGAAGAAAGAAGAGGATTGTCACCAAATGAAATCCCTTCATGCCTTCATCCTTACACTTGCCATTTTTCAGAAACCAAGACAGCAATAGATCGGTGTGTGATATGTCAGGTTGAGTATGAAGAAGGTGAGGCACTCATGGCGCTTCATTGTGAGCACCCTTATCATTCAGATTGCATAACAAAGTGGCTTCAGATTAAGAAGGTTTGTCCAATTTGTAGCTGTGAAGTCTCCACTCCAAAACTGGCTAACAACGTCCCTTAA 861 0.4367 MQTNHHCSVPSRQLKTLRLSRIWNLKNPSQKGFHYLTLKFVQNYAFAHYLKYQTRLVSVQRSQPTSVSCSGTPSSFLMEPEKGKQSSHKTPYTELEQVNSDFILAIALQEQEGTFTMLATMDSEESSNEDESESSFEDDVEDGDADDFSESQEFELGDLQLLEGEGSNDDDDDEEMEEEDEIDPDEMSYEELIELAEFVGEERRGLSPNEIPSCLHPYTCHFSETKTAIDRCVICQVEYEEGEALMALHCEHPYHSDCITKWLQIKKVCPICSCEVSTPKLANNVP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2417 286 ProSiteProfiles Zinc finger RING-type profile. 232 273 IPR001841 -
Acco10g2417 286 FunFam E3 ubiquitin ligase BIG BROTHER-related 198 279 - -
Acco10g2417 286 SMART ring_2 232 272 IPR001841 -
Acco10g2417 286 MobiDBLite consensus disorder prediction 121 187 - -
Acco10g2417 286 MobiDBLite consensus disorder prediction 68 90 - -
Acco10g2417 286 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 279 IPR013083 -
Acco10g2417 286 SUPERFAMILY RING/U-box 231 279 - -
Acco10g2417 286 Pfam Ring finger domain 231 272 IPR001841 -
Acco10g2417 286 MobiDBLite consensus disorder prediction 124 153 - -
Acco10g2417 286 MobiDBLite consensus disorder prediction 164 187 - -
Acco10g2417 286 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 78 179 IPR043312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2417 Acco-ChrAcco10 35707861 35709381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2417 130 276 C3H Transcription Factor Family AT3G63530 44.667 5.63e-32 117