Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2416 ATGGCCGCCGCAGCATCATCATCGTCTGCAGAGCTTCAGTTACCCCCCGGCTTCAGATTCCATCCCACCGACGACGAGCTCGTCACCCACTATCTCTGTCCTAAATGTGCCTCCCGCCCTATCTCCGTCCCCATCATTGCCGACATCGACCTTTACCGCCATGACCCTTGGGACCTCCCCGCTAAGGCTTTGTATGGAGAGAAGGAGTGGTACTTCTTCTCGCCCCGGAACCGTAAATATCCCAACGGTTCCAGGCCGAACCGCGCCGCCGGCACTGGCTACTGGAAGGCCACCGGAGCTGATAAACCCATCGGCCATCCCAGACCGGCCGGTATTAAGAAGGCTCTGGTTTTCTACGCCGGGAAAGCGCCTAAAGGAGAGAAAACCAATTGGATTATGCACGAGTACCGTCTGGCCGATGTGGATCGCTCTGCTCGCAAAAACACCGGCGAGCTTCCCTTAAAGCTGGATGATTGGGTGCTTTGCCGAATATACAACAAGAAGGGCATAATTGAGAAACAACCGACTGTGGGCGGCCGCAAAACTGAGTTGTCAAAGATGGAGGACATGAGGCCCGAAAATGTGTCAGAAGGTGTTGGTATTCCCGGACATACTCTTCATGCTCCGGCGGCTGCTGCCATGATCGATTACTTGATCTTTGACAAGTCGGATTCAGTCCCGAAGCTGCACACAGAGTCGAGCTGCTCCGAACATGTGGTATCGCCGGAGTTTGCGAGCGAGGTGCAGAGCGAATCCAAGTGGAATGAATGGGAAAAGAAGGCTGACTTTCCATATAATTACGCGGCGGAGGCCAACATGAACAATGGTTTGGGGTTTCAGACGACTCAGTTGGTGCAGAGCAATAATCAGATGTCGTCGTTGCAGGACATTTTCATGTACTTTCCGAAGCCCTTCTGA 918 0.5359 MAAAASSSSAELQLPPGFRFHPTDDELVTHYLCPKCASRPISVPIIADIDLYRHDPWDLPAKALYGEKEWYFFSPRNRKYPNGSRPNRAAGTGYWKATGADKPIGHPRPAGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKNTGELPLKLDDWVLCRIYNKKGIIEKQPTVGGRKTELSKMEDMRPENVSEGVGIPGHTLHAPAAAAMIDYLIFDKSDSVPKLHTESSCSEHVVSPEFASEVQSESKWNEWEKKADFPYNYAAEANMNNGLGFQTTQLVQSNNQMSSLQDIFMYFPKPF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2416 305 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Acco10g2416 305 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Acco10g2416 305 FunFam NAC transcription factor 23 171 - -
Acco10g2416 305 SUPERFAMILY NAC domain 8 167 IPR036093 GO:0003677|GO:0006355
Acco10g2416 305 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Acco10g2416 305 PANTHER NAC TRANSCRIPTION FACTOR 56 14 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2416 Acco-ChrAcco10 35702198 35703639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2416 9 305 NAC Transcription Factor Family AT1G01720 62.783 5.71e-127 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco10g2416 NAM 1.4e-37 No_clan