Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2413 ATGTCATCTGATAAGTCAAAGAAAGTGTTCGATGAAGTATCAGCGCTTTTGCTCGTGGAGAAGCTGAGGGGTATATTCGCTTCTGGCACGACGCGAAGTTACGAGTGGAGAGTTTCGCAGTTGAAGGCCCTTTCTAAGTTGCTCGATGATCGTGAGCAACAGATTATCGAAGCTCTTCGCTCTGATCTCTGCAAGCCTCCACTTGAAACCGTCGCCTACGAGATTGCTATGCTGAAAAATTCATGTAGAGTTGCACTGAAAGAACTGAAACATTGGATGAAGCCAGAAAAGGTCAAAACTTCAATCGCCACTTTTCCTTCTTCAGCAGAAATAGTGTCTGAACCTTTGGGGGTTGTGTTAATCATCTCCGCATGGAATTATCCATTTTTGTTATCACTAGATCCAGTCATTGGAGCTATTGCAGCTGGTAATACGGTGGTGCTTAAACCATCAGAAATTGCTCCAGCCACATCATCGCTGCTGGCAAAATTGTTAGAGGAGTACATGGATAACTCATCTATAAAGGTCGTTGAGGGGGCAGTTGATGAAACATCTGCTCTGCTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAGAGTGGGACGCATAGTGATGGCTGCCGCTGCAAAACACCTTACGCCAGTTGTTCTGGAGCTTGGAGGGAAATCTCCAGCAGTTGTTGATTCAGATATCAATTTACGAGTAGCAGCTAGACGGATAATTGCAGGCAAGTGGGGTTGCAACAATGGACAAGCCTGCATTTCTCCAGATTATATTCTAACAACAAAAGACTTTGCCCCCAAGTTGATTGATGCCCTGAAGACTGAATTGGGGAAATTTTATGGAGAAAACCCATTAGAGTCAAAGGATTTGTCACGCATTGTGAATTTGAATCACTTTGCTCGCTTGACAAAGCTATTGGAGGATGACAAGGTCGCTGGTAAGATTGTTTATGGAGGAGAAAAGGATGAAAGCAAATTGAGGATTGCTCCCACTATTTTATTGGATGCTCCTAGAAATTCTCTGATAATGAAGGAGGAGATATTTGGTCCTTTACTTCCTATTATCACGGTCAACAAATTGGAGGAAAGTTTCGATGTGATTAATTCAGGAACGAAACCCCTCGCTGCATATTTATTTACCAACAACAATAAGCTCAGGGAGCAGTTTGTGACGACCGTATCTGCAGGGGGTTTGGTTGTCAATGACACTACCGTACATCTCGCCACCCACACTTTGCCATTTGGAGGAGTTGGGGAGAGTGGAATGGGTTCATACCATGGGAAATTCTCTTTTGAAGCCTTTAGCCACAAAAAAGCAGTTTTGTATCGCGGCTTCAATGGAGATGCATCAGTGAGGTATCCTCCGTACACAAATTCAAAGCTCAGATTGCTCAAGGCCTTGATCGCGGGTAGTATACTCGGTATAATCCGTGCCATTTTTGGGTGGTCTTAG 1464 0.4385 MSSDKSKKVFDEVSALLLVEKLRGIFASGTTRSYEWRVSQLKALSKLLDDREQQIIEALRSDLCKPPLETVAYEIAMLKNSCRVALKELKHWMKPEKVKTSIATFPSSAEIVSEPLGVVLIISAWNYPFLLSLDPVIGAIAAGNTVVLKPSEIAPATSSLLAKLLEEYMDNSSIKVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPAVVDSDINLRVAARRIIAGKWGCNNGQACISPDYILTTKDFAPKLIDALKTELGKFYGENPLESKDLSRIVNLNHFARLTKLLEDDKVAGKIVYGGEKDESKLRIAPTILLDAPRNSLIMKEEIFGPLLPIITVNKLEESFDVINSGTKPLAAYLFTNNNKLREQFVTTVSAGGLVVNDTTVHLATHTLPFGGVGESGMGSYHGKFSFEAFSHKKAVLYRGFNGDASVRYPPYTNSKLRLLKALIAGSILGIIRAIFGWS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2413 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Acco10g2413 487 FunFam Aldehyde dehydrogenase 23 227 - -
Acco10g2413 487 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 220 227 IPR029510 GO:0016491
Acco10g2413 487 Pfam Aldehyde dehydrogenase family 35 444 IPR015590 GO:0016491
Acco10g2413 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 442 IPR016162 GO:0016491
Acco10g2413 487 CDD ALDH_F3FHI 15 446 - -
Acco10g2413 487 PANTHER ALDEHYDE DEHYDROGENASE 18 477 IPR012394 GO:0006081
Acco10g2413 487 SUPERFAMILY ALDH-like 18 460 IPR016161 GO:0016491
Acco10g2413 487 FunFam Aldehyde dehydrogenase 224 424 - -
Acco10g2413 487 PIRSF ALDH 3 482 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2413 Acco-ChrAcco10 35674270 35679002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2413 75 485 Aldehyde Dehydrogenase Gene Family AT1G44170 73.966 0.0 656