Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2411 ATGGCGGTTGAATCGGAGGTGGTGGTGGTGGGAGGGAGGGGAGAGCAAGAGCATTTTCACGTGCTGGCGGTGGATGACAGTGTCATCGACAGGAAGCTCTTAGAGAGGCTGCTTACAGTTTCTTCATGCAAAGTGACCTGCGTGGAATCTGGGGATCAAGCTTTGAAGTACCTTGGTCTGCTTGATGACCTTCACAATACTATCAATGCTTCCCCCACTTCTCCTCTTCATTCGCCCCACCATGAGGGAACAAAAGTGAATATGATCATGACAGATTACTGCATGCCTGGGATGAGTGGTTATGATTTGCTTAAACGACTCAAGGGATCTCCCTGGAAAGATATACCCGTCGTCATTATGTCTTCAGAAAATGTGCCTTCACGAATCAGCATGTGCCTGGAAGGAGGAGCAGAGGAGTTTCTATTGAAGCCTCTTCAGTTATCAGATTTGGAGAAGCTTCAACCCTACTTCCCGAAATTTCCAGACAATTCATGCGTAGGAGAATCCATATCTGCCGACAAAGAGAACGATCAGGACAATGACCACAATAACTGTAATAGTATTAGCAAACGGAAGGCCACGTCACCAGAACCTAGGGAGAAATCAAGATCCAAAATGAAAGAATATAATTAG 633 0.4597 MAVESEVVVVGGRGEQEHFHVLAVDDSVIDRKLLERLLTVSSCKVTCVESGDQALKYLGLLDDLHNTINASPTSPLHSPHHEGTKVNMIMTDYCMPGMSGYDLLKRLKGSPWKDIPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLEKLQPYFPKFPDNSCVGESISADKENDQDNDHNNCNSISKRKATSPEPREKSRSKMKEYN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2411 210 MobiDBLite consensus disorder prediction 193 210 - -
Acco10g2411 210 SMART REC_2 19 154 IPR001789 GO:0000160
Acco10g2411 210 MobiDBLite consensus disorder prediction 167 210 - -
Acco10g2411 210 Gene3D - 20 157 - -
Acco10g2411 210 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 189 IPR045279 GO:0009736
Acco10g2411 210 MobiDBLite consensus disorder prediction 172 186 - -
Acco10g2411 210 Pfam Response regulator receiver domain 21 152 IPR001789 GO:0000160
Acco10g2411 210 ProSiteProfiles Response regulatory domain profile. 20 158 IPR001789 GO:0000160
Acco10g2411 210 CDD REC_typeA_ARR 21 153 - -
Acco10g2411 210 SUPERFAMILY CheY-like 19 152 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2411 Acco-ChrAcco10 35664057 35665628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2411 12 159 Response Regulator Gene Family AT3G57040 59.333 1.70e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco10g2411 Response_reg 8.2e-18 CL0304