Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2383 ATGACGAGCTTGCGCAGCTCAAGCTCCGCTTTCGCCATGACGGGTATCGATTCCCTCCATGAACTTGATTTCTCCGGCTCCACCACCACCACTCCCCCTGCCGACGACGATGACTACTGGAACCACTGGTCCCCCCTCGTCAACTGGGACGCCTTCACCGGCCCTCAAGACGACTTCCAAGGCCTCATAGAGTCTCTGCTGGATGACTCTGCCGCCATCCTCAGCCCCCACCAACACGGCACGGAAGAAGGCTACAACTCCGCCTACTCCACGTCCACGGAAGTAACCGTGGTGGACGAGGAATTAACGGACGGTGTCGAGGATTTCAAGGGTCTCAGGCTGGTGCACCTTCTGATGGCAGCCGCCGAAGCCCTCTCCGGCGCCAATAAGACCTATGATCTGGCTCGCGTGATATTGATTCGGCTCAACGAGTTAGTTTCCCCCACCGACGGCTCCAACATGGAGAGACTGGCGGCGTATTTTACGGAAGCCTTGCAGGGTTTGCTCGAAGGCCCACAGAATAACAACCACCACCACAAGCATTTCATCGGCAGTGGACCCCACCGCGAGGACCACCCTCCACTCGATATGCTGGCCGCCTTCCAGCTCCTTCAGGACATGTCCCCCTACGTCAAGTTCGGCCACTTCACCGCAAATCAGGCCATCCTGGAGGCCGTGGCCAACGAGCGGCGAGTCCACATCATCGACTACGACATCATGGAAGGCATCCAGTGGGCCTCCTTCATTCAGGCCCTCGCTTCCAAAACGGACGGGCTACCCGGGCCACACCTCAGGATCACCGCCTTGTCCCGAAGTGGAGGCGGAAGAAGATCCATCACCACCGTGCAAGAGACGGGGCGTCGTTTGACGGCTTTTGCGGCTTCCTTGGGCCAACCGTTCTCGTTTCATCAATGCAGGCTGGACCCAGACGAAACGTTTCGACCGTCCGGTCTGAAGCTGGTTCGAGGAGAGGCCCTGGTGTTCAACTGCATGTTGCATCTCCCCCACCTCACTCATCGGGCACCCGAATCGGTGGCATCGTTCCTAAATGGAGCGAAGACGTTGAATCCGAGGCTAGTGACAATGGTAGAGGAGGAGAGGGGGTTGAGCGGAGACGGAGGGTTTGTGAGTCGGTTCATGGAGTGTTTGCACCATTACTCGGCGGTGTACGATTCAGTGGAGGCCGGGATACCCATGCAAAGCGGGGCGAGGACGCTGGTGGAGCGGGTGTATTTGGGGCCCCGAATAGCCGGGTCGGTGGTCAGGATATACAGAAACGGGGGTGAAGAGGAGAGAGGATCTTGGGGGGAGTGGTTGGGTGAAGTTGGGTACAAGGGAGTGGCCATAAGCTTCGCGAACCAATGCCAAGCCAATCTCTTGTTGGGACTCTTCAACGATGGGTTTAAGGCGGAGGTGTTGGGTTGCAATAAGTTGGTGTTGAGTTGGAGATCCAGGCGTTTGCTCTCTGCCTCTATTTGGACATCTTCTTCCCCAATCCCTCCTTCTCAGTCATTAATATTCTAA 1524 0.5728 MTSLRSSSSAFAMTGIDSLHELDFSGSTTTTPPADDDDYWNHWSPLVNWDAFTGPQDDFQGLIESLLDDSAAILSPHQHGTEEGYNSAYSTSTEVTVVDEELTDGVEDFKGLRLVHLLMAAAEALSGANKTYDLARVILIRLNELVSPTDGSNMERLAAYFTEALQGLLEGPQNNNHHHKHFIGSGPHREDHPPLDMLAAFQLLQDMSPYVKFGHFTANQAILEAVANERRVHIIDYDIMEGIQWASFIQALASKTDGLPGPHLRITALSRSGGGRRSITTVQETGRRLTAFAASLGQPFSFHQCRLDPDETFRPSGLKLVRGEALVFNCMLHLPHLTHRAPESVASFLNGAKTLNPRLVTMVEEERGLSGDGGFVSRFMECLHHYSAVYDSVEAGIPMQSGARTLVERVYLGPRIAGSVVRIYRNGGEEERGSWGEWLGEVGYKGVAISFANQCQANLLLGLFNDGFKAEVLGCNKLVLSWRSRRLLSASIWTSSSPIPPSQSLIF 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2383 507 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 92 489 IPR005202 -
Acco10g2383 507 Pfam GRAS domain family 114 494 IPR005202 -
Acco10g2383 507 ProSiteProfiles GRAS family profile. 105 494 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2383 Acco-ChrAcco10 35476494 35478017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2383 111 495 GRAS Transcription Factor Family AT5G41920 34.783 2.84e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco10g2383 GRAS 3.6e-98 CL0063