Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2372 ATGAGCAAACCCAGAAGCCAAAGGAAAGAATCCAAACATGTCAACCGAAAGCAGAATCAACAACCATTCCAGAAAACAGAGAAGCAAGCCTCTTGGGCAACGATAAGAGGCCTATTGCCTTGTAGAAGTATCCAAATTCAGCAGCCGCAGCTGGAAGTGAAACAACCAAAACAGAAACAAGAGCCAAGGAATCTACAAGAACAGGAGCAAGAAGAAGAAGAAGCAGTCACAGAAGAAAGCAGAAAGAAGTGCAAGAAAATGAGATGTTCTAGTTCACTCTGTAATAACACCAAGATCGTGGCAAAGCCTGAAACAGTGTCTCTTGACATGAACAAGGTCAAAAGGGCGTCGTCTCTGAGTGCAAGAAACACGGCCAAAAATGATGCTTTTCATTCTAACAGATCCTTGAAAGCTCCTTTGAATGAACTGAATGGGGTGGTTACTTCTGCTCCTTCTTCAAACTCTTCTGTGAACGGTTCTTTTAGGGGAATGCCATTTAGGAGATTCTCTGGTTGCTATGAGTGTCGTATGGTGGTTGACCCTTTTCTTCCTTTCACTAGAGACCCTTCTCTAAGGAGTAGCATTTACCCTTGCTCTCATTGTGGTGAGATCTTCATGAAACCTGAGAATTTAGAGCTTCATCAGGCTGTTAAACATGCAGTATCTGAACTGGGTCCAGAAGATACAAGCAAGAACATAGTGGAGATAATATTCCACTCAAGCTGGCTAAAAAACCAATCTCCAGTCTGCAAAATAGACCGCATCCTTAAAGTTCACAACACACAGAGGACAATAACCAAATTTGAAGAGTACAGAGAGTCCATCAAAGCCAAAGCTATGAAGCTTCCCAAGAAGCATCCTCGTTGCATAGCAGATGGAAATGAGCTATTGAGGTTTCATTGCACGACCTCTTTGTGCTCACTGGGCTTAAAAGGCTCCACTAACCTCTGTAACTCAACAACACAGTGCAAAGTGTGTGGCATAATCAAGAATGGCTTCAAGGTGGTCGCCGGCGGAAAAGAGATATTGACGACGGCGACAAGTGGGAAAGCACACGACAGAGCAGAGGTTTCAGATGACGAGAACAATGAGAAGAGAGCAATGCTGGTATGCAGGGTAATAGCAGGGAGGGTGAAGAAAAATATAGAAGGAGGAGTAGGAATAATAAGTACAGAGGAGTATGATTCTTTTGCAGGGGAAGTTGGGGCTTATTCCAATTTAGAAGAGTTGTATGTGTCCAATCCTAGAGCTATTTTGCCCTGTTTCGTTGTTTTTTACTCTGGTTTTTGA 1290 0.4318 MSKPRSQRKESKHVNRKQNQQPFQKTEKQASWATIRGLLPCRSIQIQQPQLEVKQPKQKQEPRNLQEQEQEEEEAVTEESRKKCKKMRCSSSLCNNTKIVAKPETVSLDMNKVKRASSLSARNTAKNDAFHSNRSLKAPLNELNGVVTSAPSSNSSVNGSFRGMPFRRFSGCYECRMVVDPFLPFTRDPSLRSSIYPCSHCGEIFMKPENLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKNQSPVCKIDRILKVHNTQRTITKFEEYRESIKAKAMKLPKKHPRCIADGNELLRFHCTTSLCSLGLKGSTNLCNSTTQCKVCGIIKNGFKVVAGGKEILTTATSGKAHDRAEVSDDENNEKRAMLVCRVIAGRVKKNIEGGVGIISTEEYDSFAGEVGAYSNLEELYVSNPRAILPCFVVFYSGF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2372 429 Gene3D - 220 427 - -
Acco10g2372 429 ProSitePatterns Zinc finger C2H2 type domain signature. 198 219 IPR013087 -
Acco10g2372 429 MobiDBLite consensus disorder prediction 1 31 - -
Acco10g2372 429 MobiDBLite consensus disorder prediction 17 31 - -
Acco10g2372 429 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 85 426 - -
Acco10g2372 429 MobiDBLite consensus disorder prediction 1 16 - -
Acco10g2372 429 MobiDBLite consensus disorder prediction 50 81 - -
Acco10g2372 429 SUPERFAMILY ADP-ribosylation 221 428 - -
Acco10g2372 429 ProSiteProfiles Zinc finger C2H2 type domain profile. 196 224 IPR013087 -
Acco10g2372 429 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2372 Acco-ChrAcco10 35392028 35393444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2372 161 426 C2H2 Transcription Factor Family AT1G75710 53.082 1.29e-97 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco10g2372 None None None