Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2366 ATGCATCGCCTACCTCGATTTTTAGGCCGTAACAAGCAAACCGAGGGCATGGACCAGAAGATCCGAAGAAAACCGAAGCTCGAGCGCCGTAATGCCGCTAAATTCTTTGAGTATGATGCTGCGTCATCTTCGTCGTCGCTGGACGACTCCTCTGGCTCTCTATATACTCGATCAATGGATTTTTACGAACGAACCAGCTTCCGAATTGAGGGCGTTGAGGGCGAGTTTGATCTAATATGCAGGAGTTTGGGGCTATCCGGACCAGAAGACTTCGCTATCCCGGCGGCGGCGTGGGAGGCTATGAAGGTTAGGTCGTCTTCGGATATTCTGCCAAGGTTGAAACTGAACGAGTTGGAAAGTCAGGAGAAGGAGGAGTTAAAAAATGAAGAGTCGAATCAATTAGTGCGTGAAGCAGATGACAAATGTGAAGAAAGGGTTACGATTAGGGATGTTACTGAATCAGCTAAAGACGAACCTGCTGAGACTAGTGGGAGCGGAGGTATCAAGGGTCTCCGTCCGCCGATGATTAAGCCACCGCCAGGGACGAGGCTTCCAGTTATTGATAACATGTGTTCTACCTGGGATATTCTGAGAGATTTTGCTCCTCAAGGCGAAAGACATTCATTGGAAAAGTATGAGGAGCCAAACTTTTCTGATGATGACCAAGAACGACAGAGAGAAACGGGGAGAGCAGAAGAGCAAAACCAAGAAGAAGCAGGAGAACGTGAGGCGGATGGGTTTACTCCGAAGTTAGAAGAGGATAATGTATCAAGGCTTACGGATGCGGTTAGAGAGCTTTCGGGATGTTCGTTTACCACGTCAAACGAAGATGATTCTTCGAGCTCATCCACGGGTCCTAGGTCTACCAATATATCTCCTAATGTAAAATTCAGACGAATTATCGCGAACTGGCAAAAGGGTGAGCTTTTGGGACGTGGTTCGTTTGGGTCTGTGTACGAAGGAATTTCTGGAGATGGATTCTTTTTTGCTGTGAAAGAAGTTTCACTGCTTGATCCAGGGAGTCAGGGACAGCAAAGTGTCTTTCAACTGGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAACATTGTTCAATACTATGGCACAGAAACGGATGAATCAAAGCTGTACATCTTTCTCGAGCTTGTTACTAAAGGCTCCCTTGCAAGCCTCTACAGGAGTTACAATCTTCGAGACTCTCAAGTGTCTGCCTACACAAGGCAGATTCTGCATGGTTTGAAGTATCTTCACGATCAAAATGTGATTCACAGGGATATTAAATGTGCCAATATATTGGTGGATGCAAGCGGATCTGTCAAGCTAGCGGATTTTGGATTAGCAAAGGCAACCAAATTAAACGATATTAAATCATGCAAGGGGACAGCATTTTGGATGGCGCCTGAGGTTGTAAAAGGTAAGAATCAAGGTTACGGGCTTCCAGCTGATATATGGAGTCTTGGTTGCACTGTATTGGAGATGTTAACCGGCCAAATTCCATACTCCAATCTGGAAGGGATGCAGGCATTGTATAGAATTGGAAAAGGTGAACTCCCGCCTGTTCCTGAATCTCTTTCAAAGGATGCAAGGGCTTTTATACTACAGTGTCTTCAAGTCAATCCAGACGAGCGTCCCACTGCTACTAAGCTGTTAAACCATCCATTTGTCCAAAGGCCACTTTCCATTTCGTCTGGCTCTGCATCCCCTTATATTCCCGGCAGAAGGAATCAATTAGTCAGCTCCAACTAA 1752 0.4583 MHRLPRFLGRNKQTEGMDQKIRRKPKLERRNAAKFFEYDAASSSSSLDDSSGSLYTRSMDFYERTSFRIEGVEGEFDLICRSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNELESQEKEELKNEESNQLVREADDKCEERVTIRDVTESAKDEPAETSGSGGIKGLRPPMIKPPPGTRLPVIDNMCSTWDILRDFAPQGERHSLEKYEEPNFSDDDQERQRETGRAEEQNQEEAGEREADGFTPKLEEDNVSRLTDAVRELSGCSFTTSNEDDSSSSSTGPRSTNISPNVKFRRIIANWQKGELLGRGSFGSVYEGISGDGFFFAVKEVSLLDPGSQGQQSVFQLEQEIALLSQFEHENIVQYYGTETDESKLYIFLELVTKGSLASLYRSYNLRDSQVSAYTRQILHGLKYLHDQNVIHRDIKCANILVDASGSVKLADFGLAKATKLNDIKSCKGTAFWMAPEVVKGKNQGYGLPADIWSLGCTVLEMLTGQIPYSNLEGMQALYRIGKGELPPVPESLSKDARAFILQCLQVNPDERPTATKLLNHPFVQRPLSISSGSASPYIPGRRNQLVSSN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2366 583 Coils Coil 112 132 - -
Acco10g2366 583 MobiDBLite consensus disorder prediction 124 157 - -
Acco10g2366 583 MobiDBLite consensus disorder prediction 268 291 - -
Acco10g2366 583 FunFam Mitogen-activated protein kinase 1, putative, expressed 302 569 - -
Acco10g2366 583 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 58 570 - -
Acco10g2366 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Acco10g2366 583 Gene3D Transferase(Phosphotransferase) domain 1 302 570 - -
Acco10g2366 583 Pfam Protein kinase domain 305 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2366 583 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Acco10g2366 583 SMART serkin_6 304 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2366 583 ProSiteProfiles Protein kinase domain profile. 304 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2366 583 MobiDBLite consensus disorder prediction 1 24 - -
Acco10g2366 583 MobiDBLite consensus disorder prediction 208 255 - -
Acco10g2366 583 MobiDBLite consensus disorder prediction 124 184 - -
Acco10g2366 583 SUPERFAMILY Protein kinase-like (PK-like) 278 563 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2366 Acco-ChrAcco10 35332478 35338629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2366 4 561 MAP Kinase Kinase Kinase AT4G08500 51.780 1.80e-179 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco10g2366 Pkinase 5e-69 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2666 05 42117067 42130930 Acco10g2366 10 35332478 35338629 CCT
Acco10g2366 10 35332478 35338629 Acco10g2366 10 35332478 35338629 ECH