Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2357 ATGAAGTGCAGGGTTGCGGAAGGAGGTTGTGGAACCGAGGACATGCCTTCCCCGGTTTCGAGGGTTCCGGTTAAATCCCTTGGGATCCAACCGGGAAATTCTGATAATTCCGCTGCACTTGATATTGATTACTACTCGCAAGCCATAAAAACGCTCAGTGAGCGCTCGCCTTTTGATGTCGCGGAAGATACTTCAACCTCGACGGTGCCCACACTGCCCAGTGGGTGCGCAAGCTTCTTAAACCGCCATTCTGAGAGTCGTAGGCGCCACAAGAAGTGCCATTCAGGTGCAGACAAGAAATCGTCTAGAACAAGTGAGAAGTCGCGTAGTTCAAGCTTCTGGGTTGAGACTGAGGATTACTTTAGAGACTTGAAATTGCCGGACATAGACACCTTGTTGGAGGCATCATCCCCTTTCAGTTTAGCCGCTCGGAATTGTTTTTCGATTCCATCAGTGGGAAATGCTACCAAGTCAAATGTAGCTAGTTTCGAGGATGACAAGGAGACTGATGGAAACCTAAATAGCGAGGATGTTAAGAATGAGGACCGCGTCGTGAAAAGTAACAGTGTTGTAGCTGGAGTTTTGGCTCAGGTTGACAAGGGTCATGATGCTTTTGATTCGTCTAGTAGTTTAGAATGGTTTTTAGGATGTAGGAATAAGACTTCTCTGATTTCTGAGCGCCCTTCGAAGAGGAGGAAGCTTTTGGGCGGGGAAGCTGGGTTGCAGAAATTCTTTATGGCCGGTCCTTGCGATGGAGACTCTCGTTTGTGCCATTATTGCTGCAGGGGAGACCCCAGTAGAGAGTTCAATCAATTAATTGTCTGCGTTATTTGTAAAGTTGCTGTTCATAAGAAGTGCTATGGTGTGCAAGATGATGTAGACGAGTCTTGGTTGTGCTCTTGGTGCAAGCAGAAGGATGGCGTTGATGAAATGGTGCATCCTTGTGTGCTTTGTCCAAAGAAGGGTGGTGCTTTAAAGCCTGTTCATAGACATGCGGAAAGTGTCGGGTCTGTGCAATTTGCTCACTTATTTTGTTGTTTGTGGATGCCTGAGGTTTATGTTGAGGATCTGAAGAAGATGGAGCCTGTTATGAATGTAGGAGGAGTCCAGGAAACCCGGAAAAAATTAGTCTGTGATATTTGCAAGGTGAAGTTTGGTGCATGTATTCACTGTTGCCATGGATCTTGCAGGTCTTCTTTCCATCCTCTATGTGCTAGGGAAGCTAGCTACAGGATGGAGGTTTGGGCAAAAAATGGTCATGACAATATTGAGTTGCGGGTCTTTTGTTCCAACCACTCAGATATACAAGAGAACAGCACCATCTTGCCTTCAGGTGGCTCTATTGCTTTTTGTAGTGATTTGTCTTCTGCTGACAGCCTTCCGGCGGAAACAGGTTGCGGTTTGAAAACTGGTTGCCACAATGGAGACAATATTGGGATATTTTCTGATGGCAGCCCTGATAAATTGAGTCATAGTGAACCACAGGATGGAATGTTGTCTGATTGTCAGTTAAATGCTCAAGAAACGTCAGAATGCAGTGGTTTGCCACAACTAAGTAATACTGCAGTGGTGGGGAGGACTGGTGAGATTGCCAATGCATCTGACTCCCTTGGTTTTGCACTTGTTTTGAAAAAGCTGATAGATCGAGGGAAAGTTGACCTAAAAAATGTGGCTTTGGAGATTGGCATTTCTTCAGAGACATTAAGCGCAAATATTAATGATTCTTGCATGGCCCCTGATGTGCAACTTAAAATAGTCAATTGGCTAAAAGCTCATGTATATACTAATGCATCTCAGAGAAGTTTGAAAGTCAAATTCAAGCCTGCCAATTCATCCAAGGCTGAAAATGGAATAACTGATGGTTCTGATACTTTACAGATATCAGATTCTGAGTTGCCAGATCCTGTTGCTGTTAAGTCAGTGCCATCGAGGAGAAGAACAACTGGTAATATCAGAAATTTGAAAGATAACAAAGTGATTTGTTCATCTGGGATGGTATCCTGTGAGAACGAAATGCCAATGGACAAGGTCAAAGGAGGTCAATCTGAACATGAAAATTCCAAAATATCAAATGAAGCATCCATTCCAGATGCAACTGAAATGGAATTAACCAAGTCTGAGGATGCTTCTTTTGATTTCCAAGGTGTTTTGGAAGAAAAGATTGCTGATGCTTCTATTTTTTCTGATCACCACCATTCTTGTGCTGCTGCAGATTTACCTCCTTCCGGTGCCATGAAGATTGAAGGGAACTCTTGTTACATTCACCCATACATCCGTGAAAAGTTATCGCAGATTCATGGTGGGGTGCTTTCAAAGGATGTTTTATGTCAAAGGGAGGAACAAAATTTTCATTTGGATGGATTCTTAGGGTCTAGTAGTGGCTCTAGTTACCAAAATCCAGAAGTAACTTGCAGTGACATTTGTAAGGCTGATAAAGTAAATACGAAGCAATTGGTTATGGCTAGAAATATGGGTTTATTAGAATGTTGTCCAAAAGATGAAGTGGATGGTGAACTGATATATTTTCAGCATAGATTATTGCAAAATTCTGTTGCAAGGAAGAAGCTTGCTGACAATTTAATCTCTAGTATAGTTAAGAGTCTTCCGCAGGAGATTGATGCAACACACCAGCAAAGATGGGATGCTGTACTTGTTAACCAGTACCTCCGTGATCTTAGGGAAGCAAAAAAGCAGGGCAGAAAAGAGAGAAGGCACAAGGAAGCACAGGCAGTGTTGGCTGCTGCAACTGCTGCTGCAGCATCATCATCTAGGGTTTCTTCCCTGCGGAAGGATGCCTTTGATGAACCTGTACAGCCAGAGAATTTGTTAAAGCACACTTTCAGTGGAAGGACTGGGGTTTGCTCTCTGCCAATGCCTCGGGCCAAAGAAACACCCTCAAGAGTAGCTATGGTTAGGACATCATCAGAAAAACATTCAGATTTTGGTATGGGAAATGCAAATTTTTCTAAGGAGCATCCCAAATTATGTGATATCTGCAGACGAGCTGAAACTATATTGAACCCAATACTCATCTGCTCTGGTTGCAAGGTTGCTGTTCACTTGGATTGTTATCGAAGTGTGAAGGAATTCACGGGTCCATGGTATTGTGAATTATGTGAAGATTTATCATTTAGAGTATTTGGGCAGCCTTCTATAAATTCCTGGGAGAAACCTTATTTTGTTGCGGAATGTGGGATATGTGGCGGGACTACTGGTGCTTACAGGAAGTCTTCAGATGGTCATTGGGTCCATGCCTTTTGTGCTGAGTGGGTTTTTGAGTCGACTTTCAGAAGAGGACAAGTAAATGCTGTTGACGGATTGGAAACTGTGTTGAAAGGAGTAGACACTTGTTGCATCTGTCACCGCAAGCATGGTGTATGCGTAAAGTGTAGCTATGGCCATTGTCAGACCACATTCCATCCATCCTGTGCTAGAAGTGCTGGTTTTTACATGAATGTGAGGGCTGCCAGCGGCAAGCTGCAGCACAGGGCTTACTGTGAAAAGCATGGTTCAGAACAGCGGGCAAAGGCTGAAAGCCAAAAACATGGAATTGAAGAGTTAAAAAGTATCAAGCAAATTAGGGTTGAGTTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAGAAGATAAAGCGGGAATTGGTTCTATGTTCACATGACATACTTGCATTCAAAAGAGATCATGTTGCTAGGTCTGTCTTGGTGCATAGCCCTTTCATACTTCCTGATTGTAGTTCAGAATCAGCTACAACATCCCTTAAAGGGAACACTGAGGGATACAGATCATGCAGTGAAGCTGTCCAAAGGTCAGATGATGTAACTGTGGACAGCTCAGTTTCTGCCAAGCATCGAGTACGAGTCGCTGTTACCATGGACAGTGATCCAAAGTTGGATGATGACTGTTCAACTTCGCAAAGTCATTATAATCATAAGATTCCTGAGAGGGCGCAATTTTCTGGCAAGCAGATTCCTCATAGAGCTTCCATCATATCACGGAATCTTTCGGATGACAGCGGATGGAAATCAAAATCAAGAAAGCATCAAGAGACATTTGGAAAAGAGCTGGTTATGACGTCAGACGAAGCATCCATGAAGAATTCAATGTTACCTAAAGGATATGCATATGTTCCTGCTGATTGCCTGTCTAATGATAAGCGATCCAAGCAGGATGTATTTACTAACGAAGCAGCGGAGCACAATGGGTAA 4215 0.4335 MKCRVAEGGCGTEDMPSPVSRVPVKSLGIQPGNSDNSAALDIDYYSQAIKTLSERSPFDVAEDTSTSTVPTLPSGCASFLNRHSESRRRHKKCHSGADKKSSRTSEKSRSSSFWVETEDYFRDLKLPDIDTLLEASSPFSLAARNCFSIPSVGNATKSNVASFEDDKETDGNLNSEDVKNEDRVVKSNSVVAGVLAQVDKGHDAFDSSSSLEWFLGCRNKTSLISERPSKRRKLLGGEAGLQKFFMAGPCDGDSRLCHYCCRGDPSREFNQLIVCVICKVAVHKKCYGVQDDVDESWLCSWCKQKDGVDEMVHPCVLCPKKGGALKPVHRHAESVGSVQFAHLFCCLWMPEVYVEDLKKMEPVMNVGGVQETRKKLVCDICKVKFGACIHCCHGSCRSSFHPLCAREASYRMEVWAKNGHDNIELRVFCSNHSDIQENSTILPSGGSIAFCSDLSSADSLPAETGCGLKTGCHNGDNIGIFSDGSPDKLSHSEPQDGMLSDCQLNAQETSECSGLPQLSNTAVVGRTGEIANASDSLGFALVLKKLIDRGKVDLKNVALEIGISSETLSANINDSCMAPDVQLKIVNWLKAHVYTNASQRSLKVKFKPANSSKAENGITDGSDTLQISDSELPDPVAVKSVPSRRRTTGNIRNLKDNKVICSSGMVSCENEMPMDKVKGGQSEHENSKISNEASIPDATEMELTKSEDASFDFQGVLEEKIADASIFSDHHHSCAAADLPPSGAMKIEGNSCYIHPYIREKLSQIHGGVLSKDVLCQREEQNFHLDGFLGSSSGSSYQNPEVTCSDICKADKVNTKQLVMARNMGLLECCPKDEVDGELIYFQHRLLQNSVARKKLADNLISSIVKSLPQEIDATHQQRWDAVLVNQYLRDLREAKKQGRKERRHKEAQAVLAAATAAAASSSRVSSLRKDAFDEPVQPENLLKHTFSGRTGVCSLPMPRAKETPSRVAMVRTSSEKHSDFGMGNANFSKEHPKLCDICRRAETILNPILICSGCKVAVHLDCYRSVKEFTGPWYCELCEDLSFRVFGQPSINSWEKPYFVAECGICGGTTGAYRKSSDGHWVHAFCAEWVFESTFRRGQVNAVDGLETVLKGVDTCCICHRKHGVCVKCSYGHCQTTFHPSCARSAGFYMNVRAASGKLQHRAYCEKHGSEQRAKAESQKHGIEELKSIKQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDHVARSVLVHSPFILPDCSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSSVSAKHRVRVAVTMDSDPKLDDDCSTSQSHYNHKIPERAQFSGKQIPHRASIISRNLSDDSGWKSKSRKHQETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKRSKQDVFTNEAAEHNG 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2357 1404 ProSitePatterns Zinc finger PHD-type signature. 996 1039 IPR019786 -
Acco10g2357 1404 MobiDBLite consensus disorder prediction 611 629 - -
Acco10g2357 1404 MobiDBLite consensus disorder prediction 1 37 - -
Acco10g2357 1404 Coils Coil 889 909 - -
Acco10g2357 1404 Pfam PHD-finger 1007 1040 - -
Acco10g2357 1404 Pfam PHD-finger 270 303 - -
Acco10g2357 1404 ProSiteProfiles Extended PHD (ePHD) domain profile. 1061 1170 IPR034732 -
Acco10g2357 1404 MobiDBLite consensus disorder prediction 83 108 - -
Acco10g2357 1404 Coils Coil 1190 1210 - -
Acco10g2357 1404 ProSitePatterns Zinc finger PHD-type signature. 257 302 IPR019786 -
Acco10g2357 1404 SMART PHD_3 1116 1170 IPR001965 -
Acco10g2357 1404 SMART PHD_3 995 1040 IPR001965 -
Acco10g2357 1404 SMART PHD_3 377 433 IPR001965 -
Acco10g2357 1404 SMART PHD_3 256 303 IPR001965 -
Acco10g2357 1404 SUPERFAMILY FYVE/PHD zinc finger 248 304 IPR011011 -
Acco10g2357 1404 MobiDBLite consensus disorder prediction 611 630 - -
Acco10g2357 1404 Pfam PHD-zinc-finger like domain 1063 1169 - -
Acco10g2357 1404 Pfam PHD-zinc-finger like domain 314 432 - -
Acco10g2357 1404 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1061 1172 IPR013083 -
Acco10g2357 1404 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 311 435 IPR013083 -
Acco10g2357 1404 CDD ePHD 1064 1169 - -
Acco10g2357 1404 SUPERFAMILY FYVE/PHD zinc finger 986 1040 IPR011011 -
Acco10g2357 1404 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 971 1045 IPR013083 -
Acco10g2357 1404 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 310 IPR013083 -
Acco10g2357 1404 ProSiteProfiles Extended PHD (ePHD) domain profile. 312 433 IPR034732 -
Acco10g2357 1404 ProSiteProfiles Zinc finger PHD-type profile. 993 1042 IPR019787 -
Acco10g2357 1404 PANTHER PHD FINGER PROTEINS 62 931 - -
Acco10g2357 1404 ProSiteProfiles Zinc finger PHD-type profile. 254 305 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2357 Acco-ChrAcco10 35267544 35278960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2357 251 437 C2H2 Transcription Factor Family AT3G14740 31.606 2.57e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco10g2357 zf-HC5HC2H_2 1.2e-21 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2357 10 35267544 35278960 Acco10g2357 10 35267544 35278960 ECH