Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2347 ATGGCTACTAGCAACTGGCTAATAGGTTCGCGGGAATGTAAACCTACAGTGGGAAAATCTTGCTACGAGATTACCTATCACGAGTGTATACTTAAAGCTCGAACGCAAGGTCAAGCTGAAACAAACCAGGGCGTCTTCACTCACACAATCACACTCACACTCACACTCTCACATCAGATAGAGACCAGAGAGGAATCACGATCACTAGCAAGAAAAACTAAAAAAGCAGTGGTAATAGGGGGCGTTTCTCTCTCGATCATAGTGGGAGGGTCACGACGTTCACAAGTTGAGGTTTTTAAAGGAAAAGGAACTGAGCTGTCGAGTTTGTCAAATATAATTCCGAGGATCAATTGGGTCTTTGATGAACTAAATTCGAAGCCTGCTGATTATTCTTTCAAGCTAAGAATCTCAGACAACCTAGAATTTATGAGTTCTCCATCAACTCAACTTGTCATCACAAAAAGGATGGGCTTATTTGAGCCATTCCAGCAAGTCATGTGGGCGGACAACTTTAAAGGTGAAAATACCCTAAATTCAGGTCCTTCCCAGATATTCATGGTGAACCCCACCACAGAGACTAAGGATGAATATATTCCTCATGAATCAACTGGGCACTCAGGAGATGATCAAGAGACAAACACTGCTGTTAGCAAGGTGCTAAGACGCTTAGCACAGAATCGCGAAGCAGCTCGAAAAAGTCGTCAAAGGAAAAAGGCTTATGTCCAACAATTAGAAACTAGCCGTTTGAAGCTCATGCAATTGGAGCTAGAGATTGAGAAAGCAAGAAAGCAGGGTCTGTATGTGGGCGGGGCATTAGATGCTACTTATATAGGATCACCTGCAACAATAAACCCAGGGATTGCAACTTTTGAGATAGAATACAGTCATTGGGTTGAAGAGCACCACAGACAAAATGCAGAACTGAGAAACGCATTGCAAACTCAGTCATCTGATGTGCAGCTCCATCTACTGGTTGAGAGTGGCCTCAATCATTACTCAAATCTTTTCAGTATGAAAGCTGAAGCTGCAAAGGCTGATGTCTTCTACTTAATCTCTGGCGTTTGGAAGGCATCTGTGGAACGCCTCTTCCTCTGGATCGGTGGATCCCGTCCATCTCAGCTTCTCAATATCATCGTGCCACAAGTGGAGGGTTTGACGGACCAACAGATAGCGAGTTGTACCAAACTCCGGCAATCTTCTCAGCAAGCTGAAGATGCTCTTTCACAAGGACTGGATAAACTTCAGCAGAATCTGGTCCTCAACACGGCAGCCGACGCATCAGATATAGGAAGCTTCGGGTTTCAGATGACTTCTCTCATGGAGAAAATTGAAGCACTAGAACATTTTGTAAGCCAGGCAGACCACCTTCGAAAACAAACCTTGCAGCATATGTCTCGGATTTTGTCGGCCCGGCAAGCAGCTCAAGGCTTGCTGGTTTTAGGCGAATACTTTCAGCGTCTTCGTGCTCTTAGTTCCCTTTGGTCAGCTCGTCCAAGCGATCCTGCATTCCAAGCTTGA 1518 0.4493 MATSNWLIGSRECKPTVGKSCYEITYHECILKARTQGQAETNQGVFTHTITLTLTLSHQIETREESRSLARKTKKAVVIGGVSLSIIVGGSRRSQVEVFKGKGTELSSLSNIIPRINWVFDELNSKPADYSFKLRISDNLEFMSSPSTQLVITKRMGLFEPFQQVMWADNFKGENTLNSGPSQIFMVNPTTETKDEYIPHESTGHSGDDQETNTAVSKVLRRLAQNREAARKSRQRKKAYVQQLETSRLKLMQLELEIEKARKQGLYVGGALDATYIGSPATINPGIATFEIEYSHWVEEHHRQNAELRNALQTQSSDVQLHLLVESGLNHYSNLFSMKAEAAKADVFYLISGVWKASVERLFLWIGGSRPSQLLNIIVPQVEGLTDQQIASCTKLRQSSQQAEDALSQGLDKLQQNLVLNTAADASDIGSFGFQMTSLMEKIEALEHFVSQADHLRKQTLQHMSRILSARQAAQGLLVLGEYFQRLRALSSLWSARPSDPAFQA 505
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2347 505 SUPERFAMILY Leucine zipper domain 218 251 IPR046347 GO:0003700|GO:0006355
Acco10g2347 505 PANTHER TRANSCRIPTION FACTOR TGA9 143 499 - -
Acco10g2347 505 Coils Coil 298 318 - -
Acco10g2347 505 Coils Coil 237 264 - -
Acco10g2347 505 ProSiteProfiles DOG1 domain profile. 287 497 IPR025422 GO:0006351|GO:0043565
Acco10g2347 505 SMART brlzneu 214 274 IPR004827 GO:0003700|GO:0006355
Acco10g2347 505 Gene3D - 217 266 - -
Acco10g2347 505 Pfam Seed dormancy control 306 379 IPR025422 GO:0006351|GO:0043565
Acco10g2347 505 Pfam bZIP transcription factor 218 247 IPR004827 GO:0003700|GO:0006355
Acco10g2347 505 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 221 236 IPR004827 GO:0003700|GO:0006355
Acco10g2347 505 FunFam BZIP family transcription factor 217 266 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco10g2347 Acco-ChrAcco10 35204189 35210036 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2347 144 501 Calmodulin-binding Proteins AT1G77920 53.209 1.99e-129 379
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco10g2347 DOG1 7.7e-26 No_clan
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2347 10 35204189 35210036 Acco10g2347 10 35204189 35210036 ECH