Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2339 ATGCATCCAATGGGAGATCCAGCTGATGAAACCCATAAAACAAAAGAGACAGATGCTTTGTCATCTTCACAGGGCCAGGCACCACACCGTCACAAAGTGGGAATTCCTCCGAGACAGAACTTGTTCAAGGAATTCAAATCCCTTGTCAAAGAAACATTCTTTGCTGATGATCCTCTACGCCCTTTCAAAGATCAGACAAAATTCAGGAAATTCATCCTTGGCATTGAAGCCGTATTCCCCATAGTTAACTGGGGAAGAGATTATAATGCTGCCAAATTCAGAGGAGATCTTATAGCTGGTCTAACTATTGCAAGTCTCTGCATTCCCCAGGATATTGGATATGCAAAGCTTGCAAATTTGGCTCCAGAGTACGGGCTATATTCCAGCTTTGTTCCCCCACTGGTTTATGCCATCATGGGTAGTTCTCGTGATATCGCCATAGGACCTGTGGCAGTTGTTTCTCTCTTGCTAGGAACCTTACTTCAGAATGAGATTGATCCTATTACACACCCATCTGAATATCGAAGACTTGCTTTCACAGCTACTTTTTTTGCTGGCATTACTCAAGCAGCTCTTGGGGTCTTCAGGTTGGGTTTTTTGATTGACTTCCTGTCCCATGCTGCTATTGTCGGTTTTATGGCCGGAGCTGCTATTACCATTGCCCTTCAACAGCTCAAGGGTTTCCTTGGCATTAAAAAGTTCACAAGGAACACTGATGTTGTGTCTGTGTTGCATTCAGTATTCTCAGCAGCCCATGATGGTTGGAACTGGCAGACTATGCTTCTAGGAGCAAGCTTTTTGGCTTTTCTGCTGATTGCTAAATATATCGGCAAAAAGAATAAGAAGTACTTCTGGGTGCCAGCTATCGCCCCATTGATATCTGTAGTTATCTCCACTTTAATTGTGTTCTTAACCCGTGCAGACAAGCAGGGTGTTCAAATTGTAAAACACATAAAGAAGGGGATCAATCCTTCTTCTGTTAAAGAGATATATTTTAGTGGTGAATTCCTTGGGAAAGGTTTCAAGGTTGGCGTTGTGTCTGGCATAATAGCACTAACAGAAGCCACGGCAATAGGAAGAACATTTGCTTCTATGAAGGATTATCATTTGGATGGAAATAAGGAAATGACAGCATTAGGAGCTATGAATATTGTTGGCTCAATGACTTCCTGCTATGTAGCAACAGGTTCTTTTTCTCGGTCGGCGGTAAATTACATGGCTGGCTGCCAAACTGCAGTATCTAATATTATAATGTCCATTGTTGTGTTCTTGACCCTTCTATTCATTACACCTCTCTTCAAGTATACCCCAAATGCCATTATTTCTTCCATCATCATATCGGCTGTAATAGGCCTTGTGGACTATAAGGCAGCAATTTTAATTTGCAAGATTGATAAATTTGATTTTATTGCGTGCATGGGAGCCTTCTTTGGGGTTGTTTTTGTCTCAGTTGAGATAGGACTTTTGATTGCCGTCTGTATATCCTTTGCTAAAATCCTATTACAAGTTACCAGACCACGAACAGCTATTCTGGGGAAGATTCCTGGGACAACTGTCTATAGAAATGTCCAACAATACCCAGAGGCCACAAAGGTTCCTGGTGTGCTGGCTGTGAGAATTGATTCTGCCATATACTTTTCCAACTCCAACTATGTTAAAGAAAGGATATTGAGATGGCTGACAGATGAGGAAGAAAGAGTGAAAGGAGAGTACCAAACACAAATCAAATTTTTGATAGTAGACATGTCACCGGTTACTGACATTGATACCAGTGGCATTCATGCCTTTGAAGAGTTATACAGAAGTCTTCAAAAGAGAGATGTTCAGCTTGTTCTGGCAAACCCAGGCCCAGTAGTGATAGACAAGCTGCACACCTCCAATTTTGCAAATCTGATCGGTGAGGACAAGATCTATCTCACAGTTGCAGATGCTGTTGCATACTGTTCTTCAAAGCTGACAGAAGAGCCTTGA 1971 0.4196 MHPMGDPADETHKTKETDALSSSQGQAPHRHKVGIPPRQNLFKEFKSLVKETFFADDPLRPFKDQTKFRKFILGIEAVFPIVNWGRDYNAAKFRGDLIAGLTIASLCIPQDIGYAKLANLAPEYGLYSSFVPPLVYAIMGSSRDIAIGPVAVVSLLLGTLLQNEIDPITHPSEYRRLAFTATFFAGITQAALGVFRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKKFTRNTDVVSVLHSVFSAAHDGWNWQTMLLGASFLAFLLIAKYIGKKNKKYFWVPAIAPLISVVISTLIVFLTRADKQGVQIVKHIKKGINPSSVKEIYFSGEFLGKGFKVGVVSGIIALTEATAIGRTFASMKDYHLDGNKEMTALGAMNIVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIIMSIVVFLTLLFITPLFKYTPNAIISSIIISAVIGLVDYKAAILICKIDKFDFIACMGAFFGVVFVSVEIGLLIAVCISFAKILLQVTRPRTAILGKIPGTTVYRNVQQYPEATKVPGVLAVRIDSAIYFSNSNYVKERILRWLTDEEERVKGEYQTQIKFLIVDMSPVTDIDTSGIHAFEELYRSLQKRDVQLVLANPGPVVIDKLHTSNFANLIGEDKIYLTVADAVAYCSSKLTEEP 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2339 656 PANTHER SULFATE TRANSPORTER 39 649 IPR001902 GO:0016020|GO:0055085
Acco10g2339 656 MobiDBLite consensus disorder prediction 1 17 - -
Acco10g2339 656 MobiDBLite consensus disorder prediction 1 34 - -
Acco10g2339 656 FunFam Sulfate transporter 31 505 651 - -
Acco10g2339 656 Pfam Sulfate permease family 93 473 IPR011547 GO:0016020
Acco10g2339 656 NCBIfam sulfate permease 80 644 IPR001902 GO:0016020|GO:0055085
Acco10g2339 656 SUPERFAMILY SpoIIaa-like 527 649 IPR036513 -
Acco10g2339 656 Gene3D STAS domain 505 652 IPR036513 -
Acco10g2339 656 ProSiteProfiles STAS domain profile. 525 648 IPR002645 -
Acco10g2339 656 Pfam STAS domain 526 644 IPR002645 -
Acco10g2339 656 CDD STAS_SulP_like_sulfate_transporter 526 641 - -
Acco10g2339 656 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2339 Acco-ChrAcco10 35144391 35147696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2339 1 655 Inorganic Solute Cotransporters AT1G22150 74.809 0.0 992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2639 05 41910488 41913519 Acco10g2339 10 35144391 35147696 CCT
Acco10g2339 10 35144391 35147696 Acco10g2339 10 35144391 35147696 ECH