Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2327 ATGAACCAGAACTTGGTTGTTGCTGATGTAAAATCATGCAGTAACACCATTATTGAGATGGCTGTGTCCATTTCTAACTTACCTATGCTTACAAGCACGGCAGTACGAGAATCGCTGGTCGTGCTAATGAAGAGGCTTGACGATGGAGGAGGAAAAGGTGGAGATAAAGTTAAAGCCTGGATTGATTCAATGAGAGCTTCCTCTCCCACACGAACCAAATCCTCCCTTCCTGTTTCTCAAGACCAACACTTGAGTTCTTGGGCTCTTCATCATCCTTCAGCGATCAACATGTTTGATCAGATAATCAATAAATCAAAAGATAAGCAAATAGTAATCTTCCTCGACTACGATGGAACTCTCTCCCCAATTGTTGCAGACCCTGATAAAGCATTCATGACTAAGGAGATGAGAGCAACAGTAAAGGATATAGCAAAACACTTCCCCACAGCTATCGTGAGTGGAAGGCGTAGAGACAAGGTTTACAACTTTGTAAGATTAGCAGAGCTGTACTATGCAGGTAGTCATGGCATGGACATCAAAGGACCGCCAAAAAGCCAAGGATCTAAGAAAGGTAATCAAGCAGCCCCGTTCCAACCGGCAAGCCAGTTCTTGCCCATGATCAATGAGGTCTACAAGATCTTGTTGGAGAAAACAAAGTGTGTAGAAGGGGCTAAGGTTGAGAATAACAAGTTTTGCTTGTCCGTGCACTTCCGTTGCGTTGACGAAAAGAGCTGGGGTGCACTGGCGGAGCAAGTGCGACTAGTTCTGAATCAGTACCCAAAACTGAAGCTGACGGAAGGCAGAAAAGTGCTTGAGATCCGACCAACCATAAAATGGGACAAAGGCAAAGCTCTTGAGTTTTTGTTACGTTCGCTTGGATTCGCCAATTCCAAGGATGTGTTTCCCATCTACATCGGGGATGACCGAACTGACGAGGATGCTTTTAAGGTGTTACGTAGGAGAGGCCAGGGGGCTGGAATTCTCGTGTCTAAAGTTGCCAAAGAAACAGAAGCTTCCTACACTTTACAGGACCCATCAGAGGCAAGTCTATATAATCTGGTTGAGCAATTTTTGCGGCGTTTGGTAGACTGGAAAAGAGAGAGTAATGAGAGTGGAAGGAGAGTTGAGCAGTAA 1134 0.4497 MNQNLVVADVKSCSNTIIEMAVSISNLPMLTSTAVRESLVVLMKRLDDGGGKGGDKVKAWIDSMRASSPTRTKSSLPVSQDQHLSSWALHHPSAINMFDQIINKSKDKQIVIFLDYDGTLSPIVADPDKAFMTKEMRATVKDIAKHFPTAIVSGRRRDKVYNFVRLAELYYAGSHGMDIKGPPKSQGSKKGNQAAPFQPASQFLPMINEVYKILLEKTKCVEGAKVENNKFCLSVHFRCVDEKSWGALAEQVRLVLNQYPKLKLTEGRKVLEIRPTIKWDKGKALEFLLRSLGFANSKDVFPIYIGDDRTDEDAFKVLRRRGQGAGILVSKVAKETEASYTLQDPSEASLYNLVEQFLRRLVDWKRESNESGRRVEQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2327 377 SUPERFAMILY HAD-like 111 357 IPR036412 -
Acco10g2327 377 FunFam Trehalose 6-phosphate phosphatase 200 276 - -
Acco10g2327 377 FunFam Trehalose 6-phosphate phosphatase 206 371 - -
Acco10g2327 377 Gene3D - 112 342 IPR023214 -
Acco10g2327 377 Pfam Trehalose-phosphatase 113 346 IPR003337 GO:0003824|GO:0005992
Acco10g2327 377 CDD HAD_TPP 111 347 - -
Acco10g2327 377 Gene3D - 200 276 - -
Acco10g2327 377 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 37 371 IPR044651 GO:0004805|GO:0005992
Acco10g2327 377 NCBIfam HAD-IIB family hydrolase 112 321 IPR006379 -
Acco10g2327 377 NCBIfam trehalose-phosphatase 108 347 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2327 Acco-ChrAcco10 35011899 35013886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2327 106 351 Trehalose Biosynthesis Gene Families AT1G70290 26.953 4.66e-10 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2625 05 41810905 41813749 Acco10g2327 10 35011899 35013886 CCT
Acco10g2327 10 35011899 35013886 Acco10g2327 10 35011899 35013886 ECH