Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2303 ATGGAGCCCTCTGATACAATATGTAGCTCTTATTACCTCCCTTATTCACGTGTTGATCCTACTGATTCCAATCACTTTTTTTCGCCTGCCATGAACCGGCCGAGTAATCATCATCAGCTTCAGCCTCTTCCTCTACTGAGCAGCTTCCTCGGTTCAGCACCTTTAAGCTCAAAACCTTACCCTACGACTACGACTCATGATGATGATGCTGGTGAGGAGGATGTCACAGTGGCCTTACACATAGGACTCCCCCATAATTCCAGTACCGCTTCTTCAGGTCCAAATGTAGTCCTCAATGAAGCCCAAGTACCCAGGAAATACTGGATCCCAACCCAAGAACAAATCCTCATCGGATTCAGTCATTTCTCTTGTCCTGTCTGCCACAAAACCTTCAACCGCTACAATAATCTTCAGATGCATATGTGGGGACATGGATCGCAGTACCGAAGAGGACCAGAGTCGCTGAAAAGAACACATCCAAGGCCGTTGTTGGACATTCCATGTTATTGTTGCGCAAGAGGATGCAGGAACAACATAGAGCACCCGAGGGCTAAGCCTCTGAAGGATTTTAGGACACTGCAGACACATTACAAGAGGAAGCATGGAAGCAAACCTTTTGTGTGTCGCAAGTGTGGCAAGACACTGGCCGTGAAGGGAGACTGGCGAACTCATGAGAAGAATTGTGGAAAGCGTTGGCTTTGCGTCTGTGGCTCTGATTTTAAACATAAGAGGTCGCTTAAGGACCATATCAAAGCATTTGGCTCTGCTCACTACCCTCTTTCTTCTTCCTCCGATGCCATCTGA 804 0.4739 MEPSDTICSSYYLPYSRVDPTDSNHFFSPAMNRPSNHHQLQPLPLLSSFLGSAPLSSKPYPTTTTHDDDAGEEDVTVALHIGLPHNSSTASSGPNVVLNEAQVPRKYWIPTQEQILIGFSHFSCPVCHKTFNRYNNLQMHMWGHGSQYRRGPESLKRTHPRPLLDIPCYCCARGCRNNIEHPRAKPLKDFRTLQTHYKRKHGSKPFVCRKCGKTLAVKGDWRTHEKNCGKRWLCVCGSDFKHKRSLKDHIKAFGSAHYPLSSSSDAI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2303 267 SMART c2h2final6 206 226 IPR013087 -
Acco10g2303 267 SMART c2h2final6 122 144 IPR013087 -
Acco10g2303 267 FunFam zinc finger protein WIP2-like 121 144 - -
Acco10g2303 267 Gene3D Classic Zinc Finger 184 258 - -
Acco10g2303 267 ProSiteProfiles Zinc finger C2H2 type domain profile. 122 149 IPR013087 -
Acco10g2303 267 SUPERFAMILY beta-beta-alpha zinc fingers 116 144 IPR036236 -
Acco10g2303 267 Gene3D Classic Zinc Finger 121 144 - -
Acco10g2303 267 Pfam Zinc finger, C2H2 type 122 141 IPR013087 -
Acco10g2303 267 SUPERFAMILY beta-beta-alpha zinc fingers 188 226 IPR036236 -
Acco10g2303 267 ProSitePatterns Zinc finger C2H2 type domain signature. 124 144 IPR013087 -
Acco10g2303 267 FunFam Zinc finger protein WIP2 175 257 - -
Acco10g2303 267 PANTHER ZINC FINGER PROTEIN WIP2 30 260 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2303 Acco-ChrAcco10 34858738 34859741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2303 29 259 C2H2 Transcription Factor Family AT1G34790 58.661 1.04e-100 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco10g2303 zf-C2H2_6 5.3e-05 CL0361