Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2297 ATGGAACCTTCTTCGGCTCAGATGGCGGGAGGGCCTCGAGATCGCAGAGCTGATGCTCTTGGAGACCTTCGAATCCTCCCCGATGAAATCCTCTGCGCAATTTTAGAGGAACTCACTCCTCGTGATGTTGCTCGCCTCGCTTGCGTTAGCAGTGTAATGTACATACTGTGCTATGAAGAACCATTATGGATGACTTTATGCCTTAAAGAAGCGTCTGGCTTACTTCAGTACAAAAGCTCTTGGAAGAAAACTGCTCTGCATTGTGAGAATTTGCCAGACAAATTCATTGAATGTAACAGAGGATTTCTGCATTTTGACGGATTTAATTCGTTATATTTGTATAGAAGATTGTATAGGTGTCATGCCAAGTTGGATGCATTTTATGTGGATAATGGAAATGTGGAAAGAAGAAAAGATATCTCTCTAGAAGACTTCCGTGATGAGTATGATGGGAAGAAACCGGTAATGCTAACTGGATTGGCTGATGCGTGGCCTGCAAGGCATAAATGGACAACTGATGAGCTGTTGATAAACTATGGAGATATTGCTTTTAAGATTTCACATCGCAGTTCTCGGAAGATGTTGATGAAGCTTAAGGATTATGTTTCATATATGAAACTGCAGCATGATGAAGATCCATTGTACATTTTTGATGAAAAGTTTGGTGAAGTTGCACCCAACTTGCTGAAGGATTACTGTGTGCCTCATTTGTTTCAAGAAGACTACTTTGATATTTTAAATGAAGATAAACGACCACCCTACAGGTGGCTCATAATTGGGCCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCTGCTCTTACCAGTGCTTGGAATACTCTTCTTTGTGGTCGCAAAAGGTGGGCATTGTATCCTCCAGGAAAGGTGCCTCTGGGAGTCACAGTGCATGTCAATGAAGATGATGGTGATGTTAACATTGAGACACCATCATCACTGCAGTGGTGGCTAGACTTTTATCCACTTCTTGCTGATGAAGACAAGCCAATTGAGTGTACACAACTACCCGGAGAGACAATTTATGTTCCAAGTGGATGGTGGCATTGTGTTCTAAACTTGGAAACGACTATTGCTGTCACGCAGAACTTTGTGAATTCCTGTAACTTTGAATTTGTATGTTTGGATATGGCCCCTGGTTATCGTCATAAAGGAGTTTGCCGTGCTGGATTGCTCGCTCTTGATGATGATGGTTATGAAGATGTCAAAAACAATATGTTCTTTGATGAACAGAATTCAAGTCATTCCATTCTGTCAAGGAGGGAGAAAAGAGCCAGCAACGATGAAGATGGAGATGATTTGAATAATGAAAGAACAAAAAATGGTGCATCTAGATATAATTTATGGAAAAATGGATTTTCTTATGATATAAATTTCTTATCCATGTTTTTGGATAAAGATAGGGACCACTACAGGTCCCCTTGGAGCTCAGGCAACAGCATTGGCCAGCGAGAACTAAGAGAATGGTTATCCAAACTTTGGGTTGGAAAACCAGAAACGAGAGAGCTGATATGGAAGGGGGCTTGTATTGCACTAAATGCTGACAAGTGGTCAGAATGCCTGTATGAAATTTGTTCCTTGCACAATATGCCCTCTCCCTTTGATGATGAAAGGCTTCCTGTTGGTACGGGTAGCAATCCTGTTTTTCTTGTGGGAAACACTGTTGTCAAAATTTTTGTTGAAGGAGGGCTAGAAGCTGTACTTTATGCTCTAGGCACAGAGCTCGAGTTTTACAATATATTGCATGAAGTCAACTCCCCTCTCAAGAATCATATTCCTGAGGTTTTGGGCTGCGGCATTCTTTATCTTGACAACGGAACATATAACAACCTTCCTTGGGATTGGAAGGGAGTCCCTGATATTGTCACCAAGAATAATCTAACTGGGCAAAGATGTGGAGTTGATGATTTCTCATTTGGTGTATGGGGCAAGAAACAGTTTGAATATAGGAATGCTGAGATGCCAAAACCCGAATCAGTTAGTTCAGCTGGCCCCTCAAATATGTGGCCTTATATTATAACAAAACGTTGTGAGGGTAAAATATTTGCAGAGTTAAGAGATAGACTATCAAGGGAAGATGTAGCAAACTTAGCTTCCTTCCTGGGAGATAAGTTGCGCCACATTCACCTTTTACCACGTCCACCGCTGAACATTTTACCTTTCTCTGATATTGAACAGGATTCAGGCTTGCCTAAGATTAATGGTAATATTGCAAGTTTTAATTCTCAATCGAGCATGGTAGCAGAGTGGGAAATCTTCATTGGAACATTATCAAGGAGAAGGAAGGATGTCTTGAGCCGTTTGACTAAGTGGGGAGATCCGATCCCTAGGAAATTGATAGAGAAGGTCGATGAATATATCCCTAATCTATTTGCAAATATGTTGAATATAACTGAGGGCAATGCTTGTAAACCATGCTCCTGGATACACTCTGACATTATGGATGATAACATTTACATGGAACCATCTTGTGTTTCTACCTCAAGTGAAACTTCTGGTGAGGAAGCGCAGGCAGACAATGGTTTTTTGTGTGATTCCAGTGTAAATAGAGATGTGAAATCATGGCGTCCTAGCTACATCCTAGATTTCAGTGATCTTTCAATAGGTGATCCTATATTTGATTTGATACCGATTTATATAGATGTATTTAGAGGTGATTCCTATCTCCTAAAGCTATTTTTAGAAAGCTACAAGCTTCCTTTTGCAATTAATAATTCAAAGAATGAGTCGACGGAGAATGATGATAAATTTGGCCGACTTTCATATCTTGCCATGTGTTACTGTATATTGCATTATGATGATGTCTTGGGAGCTATTTTTAGTATATGGGATGAACTTAGATCAGCAAATTCATGGGAAGAGGTTGAATTAACTGTGTGGGGGGAGCTGAACAATTACAAAGGCTTTCCTTGA 2928 0.4054 MEPSSAQMAGGPRDRRADALGDLRILPDEILCAILEELTPRDVARLACVSSVMYILCYEEPLWMTLCLKEASGLLQYKSSWKKTALHCENLPDKFIECNRGFLHFDGFNSLYLYRRLYRCHAKLDAFYVDNGNVERRKDISLEDFRDEYDGKKPVMLTGLADAWPARHKWTTDELLINYGDIAFKISHRSSRKMLMKLKDYVSYMKLQHDEDPLYIFDEKFGEVAPNLLKDYCVPHLFQEDYFDILNEDKRPPYRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHVNEDDGDVNIETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSCNFEFVCLDMAPGYRHKGVCRAGLLALDDDGYEDVKNNMFFDEQNSSHSILSRREKRASNDEDGDDLNNERTKNGASRYNLWKNGFSYDINFLSMFLDKDRDHYRSPWSSGNSIGQRELREWLSKLWVGKPETRELIWKGACIALNADKWSECLYEICSLHNMPSPFDDERLPVGTGSNPVFLVGNTVVKIFVEGGLEAVLYALGTELEFYNILHEVNSPLKNHIPEVLGCGILYLDNGTYNNLPWDWKGVPDIVTKNNLTGQRCGVDDFSFGVWGKKQFEYRNAEMPKPESVSSAGPSNMWPYIITKRCEGKIFAELRDRLSREDVANLASFLGDKLRHIHLLPRPPLNILPFSDIEQDSGLPKINGNIASFNSQSSMVAEWEIFIGTLSRRRKDVLSRLTKWGDPIPRKLIEKVDEYIPNLFANMLNITEGNACKPCSWIHSDIMDDNIYMEPSCVSTSSETSGEEAQADNGFLCDSSVNRDVKSWRPSYILDFSDLSIGDPIFDLIPIYIDVFRGDSYLLKLFLESYKLPFAINNSKNESTENDDKFGRLSYLAMCYCILHYDDVLGAIFSIWDELRSANSWEEVELTVWGELNNYKGFP 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2297 975 Pfam F-box-like 25 69 IPR001810 GO:0005515
Acco10g2297 975 MobiDBLite consensus disorder prediction 420 444 - -
Acco10g2297 975 SUPERFAMILY Clavaminate synthase-like 133 378 - -
Acco10g2297 975 ProSiteProfiles JmjC domain profile. 223 386 IPR003347 -
Acco10g2297 975 SMART cupin_9 218 381 IPR003347 -
Acco10g2297 975 SUPERFAMILY Protein kinase-like (PK-like) 668 902 IPR011009 -
Acco10g2297 975 CDD F-box_SF 26 58 - -
Acco10g2297 975 Gene3D - 17 95 - -
Acco10g2297 975 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 20 567 - -
Acco10g2297 975 SUPERFAMILY F-box domain 17 83 IPR036047 GO:0005515
Acco10g2297 975 FunFam F-box protein At1g78280 114 371 - -
Acco10g2297 975 MobiDBLite consensus disorder prediction 418 444 - -
Acco10g2297 975 Pfam Cupin-like domain 150 371 IPR041667 -
Acco10g2297 975 Gene3D Cupin 118 371 - -
Acco10g2297 975 ProSiteProfiles F-box domain profile. 20 66 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2297 Acco-ChrAcco10 34800843 34808437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2297 11 971 Glycosyltransferase AT1G78280 61.191 0.0 1209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Acco10g2297 Cupin_8 3.6e-20 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2297 10 34800843 34808437 Acco10g2297 10 34800843 34808437 ECH