Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2286 ATGGCGCTGCTTCGTATCTCCTGCCTCTCGTCAACAGCTAATTTCTCCGCAAAACGCCAACTTCACCCGCTTTCTTCTCTCCTTACTCTTCCCCATCCCTCCGTCGTCAATCTCTCGCTTTGTCGCTCGTCTTCCTCGTTTCATTTTCTACGTCTGTCCCTTGCGCATCCCTTGAACGATAGAAACAAAGAAATTTCCCATTTTCTACCAAGATTTGCCACTACATCCCAAGAACAAGCGCAGACTTCCTCTCCGTCAAATTTGTCCGATGACAACCAACCAGATGAGGCAAAAGCTGAAGAATTTTCTCGAACCAGGTTGCTTGCTCAAAACGTACCCTGGACCAGTACTCCTGAAGACGTCCGTTCTTTGTTCGAGAGGCATGGAAGGGTTGTAGACGTTGAGTTATCTATGTATAATAAGACTAGAAACAGGGGTTTGGCGTTCGTTGAAATGGCTTCGGAAGAAGAGGCTCTTGCGGCTTTGAATAGTCTGGAATCGTCTGAATATGAAGGGCGTACATTGAGACTCGCATATGCTAGGCCGAAAAAGAAGAAAGATCCACCTCCTGTGCAGCAGGAGACAGTAACATTTAACATATTTGTTGCAGAATTGTCCTATGAAGCGAGGGCTAAAGATCTCAGGGAGTTTTTTGATTCAGGAAGTGGTAGTGTTGTTTCTGCCGAGGTTATATTTCATGACAAGCCTAGAAGGTCCGCTGGTTATGGATTTGTATCATTCAGGTCTAAGAAAGAAGCTGAGGCTGCCCTTTCTGAGTTCCAAGGGAAGATTTTTATGGAAAGGCCAATCAGGGTGGCACGTAGCAAGCAGTTTGTTAAACAACCGGTAGAGGAGAGTGCAAGATAG 867 0.4591 MALLRISCLSSTANFSAKRQLHPLSSLLTLPHPSVVNLSLCRSSSSFHFLRLSLAHPLNDRNKEISHFLPRFATTSQEQAQTSSPSNLSDDNQPDEAKAEEFSRTRLLAQNVPWTSTPEDVRSLFERHGRVVDVELSMYNKTRNRGLAFVEMASEEEALAALNSLESSEYEGRTLRLAYARPKKKKDPPPVQQETVTFNIFVAELSYEARAKDLREFFDSGSGSVVSAEVIFHDKPRRSAGYGFVSFRSKKEAEAALSEFQGKIFMERPIRVARSKQFVKQPVEESAR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2286 288 PANTHER OS02G0815200 PROTEIN 26 274 - -
Acco10g2286 288 Gene3D - 187 285 IPR012677 -
Acco10g2286 288 MobiDBLite consensus disorder prediction 74 92 - -
Acco10g2286 288 MobiDBLite consensus disorder prediction 74 102 - -
Acco10g2286 288 Gene3D - 60 186 IPR012677 -
Acco10g2286 288 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 198 277 IPR000504 GO:0003723
Acco10g2286 288 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 110 176 IPR000504 GO:0003723
Acco10g2286 288 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 200 271 IPR000504 GO:0003723
Acco10g2286 288 SMART rrm1_1 106 178 IPR000504 GO:0003723
Acco10g2286 288 SMART rrm1_1 199 273 IPR000504 GO:0003723
Acco10g2286 288 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 105 182 IPR000504 GO:0003723
Acco10g2286 288 SUPERFAMILY RNA-binding domain, RBD 105 274 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2286 Acco-ChrAcco10 34752464 34754137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2286 105 277 Eukaryotic Initiation Factors Gene Family AT3G16380 29.348 5.24e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2286 10 34752464 34754137 Acco10g2286 10 34752464 34754137 ECH