Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2285 ATGGAGCAATGGGGTCGAGGAACCGAAGAAGAAGAAGCTGCTATAGGACAGGAAGCGGGTTCGCCGCAGAACATCACCAAGGATTTCAATTTTGACGCCCTCAATGAACGATGCACTTGGACAAAGCCTGGTGGAACTTCAGCATCACTTTGTCAAGGTAGGAGAGTTACAGTGAATGCACCAAGGATGCACAGAAAGCTCTTCCCCGCATCAACCACGACAAATCAAACACAAGATTGTTCTGATTTTTGTGACCCAGCTTGCCCTTACAACTGCTACTCTTACCCAGTCCACTACTTCCCGCCGCCGCCCATTTCACCTCCAAGTATTCAGATCTCATCCTACTTGGCCATCGCTGCTTCACTATTCACTGTCGTATTTGTTCTTGTCGGTTTCTATGTTCTCAAAGTAAAGTGCTACTCCGATTGGTGTGGTTGGAGACGCAATGGATCCTTTAGCACCCAATCAGGCAGGCTTGTGGATGAGTTTGTTGGTGAGAATCAAGTTGATCATCGTATCTGGCTGATAACCACCTTTGGTTTACAGCAGTCAATCATAAACTCCATTACGGTTTCCAAGTACAAAAAGGGTGAGGGATTGATCGACGGAACTGAATGTTCTGTGTGCCTGAGTGAATTCAAGGAAGACGAAACCTTGAGAGTGTTGCCAAAGTGCAACCATGCCTTTCACATCCCCTGTATCGACACGTGGTTGAGCTCTCATATCAACTGTCCTCTTTGTCGTGCCCCTATTGTCCCCAGCAATGCCAGTTCCAATGCAGCCATCTTAAATGCGAGTTCAATGGAGGAAAACTCTGTCACAGCGGTGAGAAATGAATATGCCCAAGTTGAGCGTGAAGGCGGTGAATCAATTAGCATGGTCTCCGAAAACCGCGAGGGAACACGACAAGAAGGGGAAACCGAAGACTTCACTCATGAATCAATTTTGAAGACCTGCACGGATTCAGATGAGGATAAACAGATCGTAGATGGAATACGAAAAGGAACCAATTCTGCATCGATGGATTCTTCCGTTGATCATATAAACGGTGACATTGAACGACACACAGTCAATCTTCTGAAGAAAGATGGTGAATATTCAACACTCTTTAAATCAGCGCGTCGTTCTTCAGTTTCACAATGTCTTCACGTAACCCCTATTTCCATGAAGAGGTCAGCCGTGTCCTGCTGCGGGAGGATTGCATCTACGGGAGGCTACAGGAGTCTTAATTCAAGTCTTCCTCACCAGTATTTAAAAAATATCAAAACATGTACACAGATTTCATCAACATGA 1293 0.4563 MEQWGRGTEEEEAAIGQEAGSPQNITKDFNFDALNERCTWTKPGGTSASLCQGRRVTVNAPRMHRKLFPASTTTNQTQDCSDFCDPACPYNCYSYPVHYFPPPPISPPSIQISSYLAIAASLFTVVFVLVGFYVLKVKCYSDWCGWRRNGSFSTQSGRLVDEFVGENQVDHRIWLITTFGLQQSIINSITVSKYKKGEGLIDGTECSVCLSEFKEDETLRVLPKCNHAFHIPCIDTWLSSHINCPLCRAPIVPSNASSNAAILNASSMEENSVTAVRNEYAQVEREGGESISMVSENREGTRQEGETEDFTHESILKTCTDSDEDKQIVDGIRKGTNSASMDSSVDHINGDIERHTVNLLKKDGEYSTLFKSARRSSVSQCLHVTPISMKRSAVSCCGRIASTGGYRSLNSSLPHQYLKNIKTCTQISST 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2285 430 SUPERFAMILY RING/U-box 199 254 - -
Acco10g2285 430 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 181 256 IPR013083 -
Acco10g2285 430 PANTHER RING-H2 FINGER PROTEIN ATL16 111 353 IPR044600 GO:0016567|GO:0016740
Acco10g2285 430 SMART FANCL_C_2 202 255 - -
Acco10g2285 430 CDD RING-H2_EL5-like 205 248 - -
Acco10g2285 430 ProSiteProfiles Zinc finger RING-type profile. 206 248 IPR001841 -
Acco10g2285 430 SMART ring_2 206 247 IPR001841 -
Acco10g2285 430 FunFam RING-H2 finger protein ATL54 181 254 - -
Acco10g2285 430 MobiDBLite consensus disorder prediction 1 23 - -
Acco10g2285 430 Pfam Ring finger domain 205 248 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2285 Acco-ChrAcco10 34749559 34752391 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2285 60 252 C3H Transcription Factor Family AT1G72220 48.214 2.35e-58 195