Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2271 ATGGGCTATCTTTCTTGTTATGATGCTAAGTCTGCAATCACCACCTGCCAATGCGATCTACTCTGCTGGGACGTAAACACATTCCCAAAAGCAAGGAAATCTAAGCGGAATAAGAAGCTACCGGGGATCAGAAAGTTTGAGTATTTAGACCTGGTGGCAGCCACAAACGGGTTCTCGGCAGATAGCTTCCTAGGCAAAGGCAGCCACGGCAGCGTCTACAGAGCAACCCTCGACGACGGTAAGCTCGTAGTTGCCGTCAAAACATCAACATTCAAAAAGACATCGGCGACAAGCCTCCTTAATCACAGCCTCAAACGTACGGGCTGTACCAAGTGTACCAGCCCTGCAGAGAACGAGGTCGAGATTCTTTCCGGAATCCCAAGCTCTCGCCGCATAGTCAACCTCATCGGCTTCAGCACGGACTCTAACCTCAACAAATTGATTGTCGTCGAGTACATGCCCAACGGCTCCCTCCACCTTCTCTTGCACTCCGCGCCCAATCCGCCAAGCTGGGCCCGACGTGTACGGTTCGCATTGCAGGTGGCAGAAGCGGTTCGGACTCTCCACTCTTCCAACCTGCCAGTGATTCACCGGGACATCAAATCTTCAAACGTTTTAATCGACAGCGACTGGAATGCGAGACTGGGCGATTTCGGCCTCGCTCTCAGGGGGCACGAAAATGGTTTTGGGGGGAAAGTCACTCTGCCGGCGGGGACTTTAGGATATCTTGACCCCTGCTATCTGACGCCAGGGGATCTAAGTGAGAAGATCGACGTGTTCAGCTTTGGGATCTTGTTACTGGAGATAATCAGCGGTAGGAACGCAATCGACGTGAAGTACAGCCCGCCGTCGGTCGTTGAGTGGGCCGTGCCGTTAATAAAGAAGGGTGAATTTGAGGCAATCGCTGACCAGCGGATGGGAACGCCGTCAGACCCGAGGGTGATAGAAAGGCTGGCGGTGTTGGGGGCGAGGTGCGTGAGGTGGAAGGCGGAGAAGAGGCCGACGATGGCGGAGGTAGTGGAGTGTTTAAAACAAGTGAGGAAGAGGATTTATGGTTGGCCAATATGGAGGAGCGTGAAGAGGCGGGTGGGGCGGACGGAGAAAACAGAGTCGCTAATAAAGATGGGAAGCAGAAGAAACGAGAAGGTGTTGAGTGTGTGTGTTGCAGATCATGACACGAGTGAAGCTGGGAATGATCAAGAGGTGAGGTCGAAATCGATTCGTTGTGAAGGGGAGATGAAAATGCAGCGTAATCAGAGTGGAAATACTCAACTTGGGCTGTTGGTAAGAAGGAAGGAGGAAGTGGAACTAAAAAGGTCGAGGTCCGGGGGAGTTTTACACAATCCACGGCTTTCACCTTGCTGGACAGAGCTTTATAACGATGATGATGATAATCACCATTCCATTCCGCAGGTGGAATTATAA 1425 0.5193 MGYLSCYDAKSAITTCQCDLLCWDVNTFPKARKSKRNKKLPGIRKFEYLDLVAATNGFSADSFLGKGSHGSVYRATLDDGKLVVAVKTSTFKKTSATSLLNHSLKRTGCTKCTSPAENEVEILSGIPSSRRIVNLIGFSTDSNLNKLIVVEYMPNGSLHLLLHSAPNPPSWARRVRFALQVAEAVRTLHSSNLPVIHRDIKSSNVLIDSDWNARLGDFGLALRGHENGFGGKVTLPAGTLGYLDPCYLTPGDLSEKIDVFSFGILLLEIISGRNAIDVKYSPPSVVEWAVPLIKKGEFEAIADQRMGTPSDPRVIERLAVLGARCVRWKAEKRPTMAEVVECLKQVRKRIYGWPIWRSVKRRVGRTEKTESLIKMGSRRNEKVLSVCVADHDTSEAGNDQEVRSKSIRCEGEMKMQRNQSGNTQLGLLVRRKEEVELKRSRSGGVLHNPRLSPCWTELYNDDDDNHHSIPQVEL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2271 474 Pfam Protein kinase domain 61 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2271 474 SUPERFAMILY Protein kinase-like (PK-like) 41 356 IPR011009 -
Acco10g2271 474 Gene3D Phosphorylase Kinase; domain 1 28 152 - -
Acco10g2271 474 Gene3D Transferase(Phosphotransferase) domain 1 153 351 - -
Acco10g2271 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Acco10g2271 474 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Acco10g2271 474 PANTHER OS01G0253100 PROTEIN 37 348 - -
Acco10g2271 474 ProSiteProfiles Protein kinase domain profile. 58 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2271 474 SMART serkin_6 58 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2271 Acco-ChrAcco10 34633166 34634590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2271 44 354 Receptor kinase-like Gene Family AT3G59420 40.190 8.91e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Acco10g2271 Pkinase 1.3e-34 CL0016