Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2263 ATGACGTGGGATGAGTGGGACAATAATATCCCAGAAGGTGCTCAACCTGACCAAGATTCCCATCTCAACTTCGATTTCTTCTCTGCTCTGTTCAAGCCCAAGGATTATTACAAGATTCTGGAAGTAGATTATGATGCCACAGACGACGCTATTCGTTCCAATTACATTCGTCTAGCTCTGAAATGGCATCCGGACAAGCAGAAAGACCAAGATGCCGCAACCTCACAATTCCAAGAGATAAACGAGGCTTATCAGGTCTTGAGCGATCCTGCCAAAAGGAGAGAGTATGACGAAAATGGGATGCTCTATGTCTACGATTGCAATCTCATGGATTATCTTAATCGTTACAAGAGCCTTATATTGACGTGTAATGGCCTTGGGATGAAGCAATTCATATGGTAA 402 0.4328 MTWDEWDNNIPEGAQPDQDSHLNFDFFSALFKPKDYYKILEVDYDATDDAIRSNYIRLALKWHPDKQKDQDAATSQFQEINEAYQVLSDPAKRREYDENGMLYVYDCNLMDYLNRYKSLILTCNGLGMKQFIW 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2263 133 ProSiteProfiles dnaJ domain profile. 35 100 IPR001623 -
Acco10g2263 133 Gene3D DnaJ domain 28 111 IPR036869 -
Acco10g2263 133 FunFam Chaperone protein DNAj, putative 27 114 - -
Acco10g2263 133 SUPERFAMILY Chaperone J-domain 31 121 IPR036869 -
Acco10g2263 133 Pfam DnaJ domain 35 97 IPR001623 -
Acco10g2263 133 PRINTS DnaJ domain signature 55 70 IPR001623 -
Acco10g2263 133 PRINTS DnaJ domain signature 72 92 IPR001623 -
Acco10g2263 133 PRINTS DnaJ domain signature 92 111 IPR001623 -
Acco10g2263 133 PRINTS DnaJ domain signature 37 55 IPR001623 -
Acco10g2263 133 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 133 - -
Acco10g2263 133 SMART dnaj_3 34 92 IPR001623 -
Acco10g2263 133 CDD DnaJ 35 89 IPR001623 -
Acco10g2263 133 ProSitePatterns Nt-dnaJ domain signature. 77 96 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2263 Acco-ChrAcco10 34572941 34574869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2263 28 97 C2H2 Transcription Factor Family AT1G74250 42.667 9.75e-12 59.3