Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2253 ATGCAGACGCCCAGTCCCGGATCCACCGTGGAGGTGGCCAAGAAATCTAGGGGCCGCCCTAGAGGCTCCAAGAACAGGCCTAAAGAAGCCGCACGTCCTCCCGTACCCCGCGCCGCCGGCGACGTGATGGCTCCTTACATTCTTGAAGTTCCTGATGGCAACGACATCGTCCGGGCCATTTCCCAGTTTAGCATCAGCAAGAACACCAACCTCTGCGTCCTTACGGCTTCCGGCTCCATTGCTAACGCCTCTCTCCGTCCCTCCTCCGCCGCCTCTGCTCCTGGTATCTCTTGTCCCGGTCATCACGCCATCCTCTCCATGTCCGCCACATTCGCCCCTCACCAATACCCCACTGCAGATTACACCCCCAGACCCCTCACCGTCAGCCTGGCCTCCTCGAACGGCCGCGTCATCGGAGGATTTGTACTTGGAAGTTTGGTCTCAGCCGGCTCAGTCTACGTCATGGCAATTTCATTCAACCGCCCATCCTATTATAATATATCATCACATAAAGATGAGGAGAGCGTGCGAAACATGGCCGCCGCCGGAGGAGAAACTAGGTACGCGCCGCCTCACCTGCCTGGAGGGATTCCTATGTATAGAGATAACCTAACCGCCGTTCATGGGCTTTGGCCTCCAGTGATTAGGTCATCACAACCTGCACCGTTGACTCATCAGTATTAA 684 0.5673 MQTPSPGSTVEVAKKSRGRPRGSKNRPKEAARPPVPRAAGDVMAPYILEVPDGNDIVRAISQFSISKNTNLCVLTASGSIANASLRPSSAASAPGISCPGHHAILSMSATFAPHQYPTADYTPRPLTVSLASSNGRVIGGFVLGSLVSAGSVYVMAISFNRPSYYNISSHKDEESVRNMAAAGGETRYAPPHLPGGIPMYRDNLTAVHGLWPPVIRSSQPAPLTHQY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2253 227 MobiDBLite consensus disorder prediction 1 37 - -
Acco10g2253 227 MobiDBLite consensus disorder prediction 14 31 - -
Acco10g2253 227 CDD DUF296 45 159 IPR005175 -
Acco10g2253 227 ProSiteProfiles PPC domain profile profile. 40 183 IPR005175 -
Acco10g2253 227 Pfam Plants and Prokaryotes Conserved (PCC) domain 45 160 IPR005175 -
Acco10g2253 227 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 12 180 IPR014476 GO:0003680
Acco10g2253 227 SUPERFAMILY AF0104/ALDC/Ptd012-like 42 164 - -
Acco10g2253 227 Gene3D - 44 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2253 Acco-ChrAcco10 34497959 34498642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2253 8 220 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 40.586 1.44e-43 146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2253 10 34497959 34498642 Acco10g2253 10 34497959 34498642 ECH