Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2239 ATGCCTCACAGGGCGACTTACATTTTCCCGAGGCAATTTCCGGACCATAGATTGGATGAATCTTCCCAACAGCTCTTAGATCACGAGAGGAAGAAGATCCCCGACTCCATAAAGTCGGGGACATTTGGCGCTGAAGGTGACGTTGATAAGAAAAAGCCGTCACTATCAACCACTACTCCCATTAAAAACGATGTCATTTATTCGCCAAGTAAACACTCAGCTGTATCCGATCTTCTCACGGGTGGTGGCAAGCTTCGGGCTAGACGCAAGCAAGTTGCTGATATCTGCAATTGGTCGACAGAGAAAAAGGGGGGAAGATCGGGTCACGTGAAACCGTACTCTCACAGGTCGTCCAGCGAGGAAGAACGCGAGCTTCTTCTTCCGCCGGAGTCGTCGGTGCCGCCGCCGCCGCCCCCACCGGAGACAGTAAAGAATAACTCTGCCTTTGACCAGAGCCTTGATCGGCAAGTGTCGTTACCAAGGTTGTCCAGTAATGGGAGTAGCTATGCTGGGAGCTTGTTCTCGGGGACAACGTTGGATGGCAATTTTTCCAGTGACATTATTAAGGAGGAAACGACGTTATCCATTTTCACCTCGTCGAGGAAGCAAGATAATGAAGATGAAAAGGAGAGTAAATATAAGATAGTGCAGAAGTCCAAAGAGAGCTACCAACTGCAACTTACGTTGGCTAAGAGGCTCACTGGTCTAGCAAGTATTGCTCCTGAGCCTGCTCTTACTCTGGGAACTGAAATCGAAACTTGTGATACCGAATCCGTTTCTTATCGTTTGTGGGTGAGCGGCTGTTTATCATATTCTGACAAGATAACGGATGGTTTTTATAACATTCTGGGGATAAATCCATATTTGTGGGCAATGTGCAATAATGAAGAGGAAGGAAGACGGCTGCCATCTCTGTTGGCGCTTAAAGCAGTCGAACCTAGCGAGACATCTATGGAGGTGGTACTTGTTGATATCCATGAGGATTCCAGGCTAAAGCAACTTCAAGATAAAGCACAAGAACTGTATTGTGCTTCAGAGAACACCTTGGTGTTGGTGGAAAAGCTAGGAAAACTTGTTGCCATTTATATGGGGGGAACTTTTCCGGCAGAACAAGGTGATCTCCATGGGCACTGGAAGTTGGTTAGTAAGAGACTGAGGAATTTTCACAAGTGTGTTGTGCTTCCTATTGGCAGCCTATCTTCTGGACTTTGTAGGCATCGAGCTATTCTTTTCAAGAGGTTGGCAGATTACATAGGTTTGCCATGCCGTATTGCTCGAGGTTGCAAGTATTGTGTTGCTGACTATCGATCCTCTTGCCTTGTCAAGATTAAAGATTACAAGCAATTCTCTAGGGAATATGTAGTTGATCTAGTTGGGGAGCCAGGAAATGTCCATGGGCCAGATTCCTCTATCAATGGAGCATATGTCTCCTCCATGCCTTCCCCGTTTCAAATTTCTCATTTAAAGGAGTTCCAATCACCATGTCTGGACGTTGCAGCATGTTCTCAATCTTTAAGTCCCGAACATAGTTTTGTGGTTAATGACAGTCGTTTATATTCAGGCTGTGGACAGAACCATCAGCAAGTTAGTGAAACTGATTTGCTAATAAACCCTACGGGCTCCGCTTACGCATCCGTTGATCAAACTTCGGAAGGAACAGAACCTCCTCCGATTCCTTTTGGCTTGAAAAGGAATGTTGAGGAATGTGCAGTTCTAGGTTCAATTTCACCTTCAATCTGGGAAGGTGTTTCTGAATCCCTTCACCCACCAGTTGAGGCACCATTACATGAATATCCCAGGCTTGGTGGAGATCCAGTTGTAGTACATGAAACTTCCAACAATGAGAAAAGTTCTTTGAAAAAATCTATATTGAGCTCTTCAAAGCAGTCAGAACCGGAGAAGGTAGACAATGGACTTGAAAACCCAGGCTACTTTCCGGCTACGGATATTCCAAGATACTTGAATCTCGAACCATCACTTGCAATGGATTGGCTGGAGATACCATGGGATGATTTACGCATCAAAGAGCGTGTTGGTGCTGGTTCCTTTGGGACAGTGCACCGTGGTGAATGGCATGGATCAGATGTTGCAGTCAAAGTTCTATCAATCCAAGATTTCCGTGAAGATCGATTGAAAGAATTTCTGAGAGAGGTTGCAATAATGAAGCGCGTGCGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGCCCTCATCTGTCCATAGTGACAGAATATTTGCCAAGGGGTAGTTTATACCGCCTGATTCATAGACCCACAACTGGCGAAAATCTGGATCAAAGGAGAAAATTGCGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTCCACTGCCTTAACCCTCCGGTTTTGCACTGGGATCTCAAATCCCCAAACTTGTTGGTGGACAAAAATTGGACCGTAAAGGTGTGCGATTTTGGATTGTCAAGATTCAAGGCCGAGGCTTTCATATCATCAAAATCAGTTGCTGGAACACCCGAGTGGATGGCTCCTGAATTCCTTCGCGGAGAACCTTCAAATGAGAAGTCTGATGTCTACAGTTTTGGAGTCATCTTGTGGGAGCTTGTGACCATGCAACAACCGTGGAGTGGTCTTAACCCTGCCCAGGTGGTTGGAGCCGTTGCTTTCCAAAATAGGAGGCTTGTTATCCCTCCAAACATCTCGCCAGCACTTAGCTCTCTCATGGAATCTTGTTGGGCTGATGACCCTAATGAACGACCATCTTTCGCTAACATAATGGACTCGCTGAAGAAGCTGCTGAAGTCTCCAGCTGAGGCTATAAAAATGGCCTTCTACCACTTTATTTCGGACGAGCCCCCTCCGGAGGAAAATTCGATGGATAAGAATGACAGAGAATACATGTGGCGCGATATCGGGCTGCAAATTGTTATGATCCTGGTCATGGTGTTCATGTTCTTGCATATGCACGACATTCCCAGGAAGCTCTTCACCAAGTTCCGTCTTCGTAGCCGATCCGACATTCAAGCCAAGCGCCACTTCGTTCAAGGCGCTCAGCTCCTTGCGCGGGCCAGATCCTCCAAGACTCGATCCACTTCGAATTCACTGGCCAAAGATGCCCTAGCCGAAGCAGAGAAAGCCATCGCGCTTGACCCCAAGGATGCAGCCGCTTACCTTCTCAAGGCCTTGGCTCTTGATCTCCAAGGCTTTAGGACTTCGGCTCTTGACTCGCTTGACATGGCTTTGTCTCCGCTTGCGGTGAAGTCCCTCGACGTTCAAGAGAAAGGGGACGCGCTTCTCAAGAGGGCTGAGTTGAAAATGGCGATGAATGAACGCGGCCGGGTCGACTCGGCTCTAGCGGATTTGATTGAGTCGGTAAAGATGAATTCGAAAAACTTCAAGGCTTTTTGTTTGTTAGGGAAATGCTATGAGGCAAAGAAGATGACAGAGGAAGCCAGGACGGCTTATGAGGAGGCTCTCAAGGTGGAACCCCAGTCAACTGTGGCTCAAGAGGCCTTAAGCAGATTGGGTTCATAG 3525 0.4704 MPHRATYIFPRQFPDHRLDESSQQLLDHERKKIPDSIKSGTFGAEGDVDKKKPSLSTTTPIKNDVIYSPSKHSAVSDLLTGGGKLRARRKQVADICNWSTEKKGGRSGHVKPYSHRSSSEEERELLLPPESSVPPPPPPPETVKNNSAFDQSLDRQVSLPRLSSNGSSYAGSLFSGTTLDGNFSSDIIKEETTLSIFTSSRKQDNEDEKESKYKIVQKSKESYQLQLTLAKRLTGLASIAPEPALTLGTEIETCDTESVSYRLWVSGCLSYSDKITDGFYNILGINPYLWAMCNNEEEGRRLPSLLALKAVEPSETSMEVVLVDIHEDSRLKQLQDKAQELYCASENTLVLVEKLGKLVAIYMGGTFPAEQGDLHGHWKLVSKRLRNFHKCVVLPIGSLSSGLCRHRAILFKRLADYIGLPCRIARGCKYCVADYRSSCLVKIKDYKQFSREYVVDLVGEPGNVHGPDSSINGAYVSSMPSPFQISHLKEFQSPCLDVAACSQSLSPEHSFVVNDSRLYSGCGQNHQQVSETDLLINPTGSAYASVDQTSEGTEPPPIPFGLKRNVEECAVLGSISPSIWEGVSESLHPPVEAPLHEYPRLGGDPVVVHETSNNEKSSLKKSILSSSKQSEPEKVDNGLENPGYFPATDIPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVHRGEWHGSDVAVKVLSIQDFREDRLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPTTGENLDQRRKLRMALDVAKGINYLHCLNPPVLHWDLKSPNLLVDKNWTVKVCDFGLSRFKAEAFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLNPAQVVGAVAFQNRRLVIPPNISPALSSLMESCWADDPNERPSFANIMDSLKKLLKSPAEAIKMAFYHFISDEPPPEENSMDKNDREYMWRDIGLQIVMILVMVFMFLHMHDIPRKLFTKFRLRSRSDIQAKRHFVQGAQLLARARSSKTRSTSNSLAKDALAEAEKAIALDPKDAAAYLLKALALDLQGFRTSALDSLDMALSPLAVKSLDVQEKGDALLKRAELKMAMNERGRVDSALADLIESVKMNSKNFKAFCLLGKCYEAKKMTEEARTAYEEALKVEPQSTVAQEALSRLGS 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2239 1174 ProSiteProfiles TPR repeat profile. 1129 1162 IPR019734 GO:0005515
Acco10g2239 1174 Gene3D Transferase(Phosphotransferase) domain 1 751 939 - -
Acco10g2239 1174 MobiDBLite consensus disorder prediction 129 143 - -
Acco10g2239 1174 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 244 931 - -
Acco10g2239 1174 MobiDBLite consensus disorder prediction 31 62 - -
Acco10g2239 1174 Pfam Protein tyrosine and serine/threonine kinase 672 926 IPR001245 GO:0004672|GO:0006468
Acco10g2239 1174 Gene3D Phosphorylase Kinase; domain 1 665 749 - -
Acco10g2239 1174 MobiDBLite consensus disorder prediction 611 641 - -
Acco10g2239 1174 Pfam Ethylene-responsive protein kinase Le-CTR1 256 464 - -
Acco10g2239 1174 ProSiteProfiles Protein kinase domain profile. 672 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2239 1174 MobiDBLite consensus disorder prediction 611 632 - -
Acco10g2239 1174 FunFam Serine/threonine-protein kinase isoform 1 662 750 - -
Acco10g2239 1174 SUPERFAMILY Protein kinase-like (PK-like) 651 925 IPR011009 -
Acco10g2239 1174 CDD STKc_MAP3K-like 678 926 - -
Acco10g2239 1174 PRINTS Tyrosine kinase catalytic domain signature 787 805 IPR001245 GO:0004672|GO:0006468
Acco10g2239 1174 PRINTS Tyrosine kinase catalytic domain signature 853 875 IPR001245 GO:0004672|GO:0006468
Acco10g2239 1174 PRINTS Tyrosine kinase catalytic domain signature 746 759 IPR001245 GO:0004672|GO:0006468
Acco10g2239 1174 PRINTS Tyrosine kinase catalytic domain signature 897 919 IPR001245 GO:0004672|GO:0006468
Acco10g2239 1174 SMART serkin_6 672 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2239 1174 SMART tpr_5 1129 1162 IPR019734 GO:0005515
Acco10g2239 1174 SMART tpr_5 1092 1128 IPR019734 GO:0005515
Acco10g2239 1174 ProSitePatterns Protein kinases ATP-binding region signature. 678 699 IPR017441 GO:0005524
Acco10g2239 1174 MobiDBLite consensus disorder prediction 104 127 - -
Acco10g2239 1174 MobiDBLite consensus disorder prediction 98 146 - -
Acco10g2239 1174 FunFam Serine/threonine-protein kinase CTR1 751 936 - -
Acco10g2239 1174 Coils Coil 1172 1174 - -
Acco10g2239 1174 Gene3D Tetratricopeptide repeat domain 1001 1173 IPR011990 GO:0005515
Acco10g2239 1174 SUPERFAMILY TPR-like 1034 1169 IPR011990 GO:0005515
Acco10g2239 1174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2239 Acco-ChrAcco10 34388300 34396664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2239 1 940 MAP Kinase Kinase Kinase AT4G24480 56.244 0.0 1031
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Acco10g2239 PK_Tyr_Ser-Thr 1.4e-65 CL0016